KEGG   Rhizobium johnstonii: RL1620
Entry
RL1620            CDS       T00402                                 
Symbol
glyA
Name
(GenBank) putative serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
rle  Rhizobium johnstonii
Pathway
rle00260  Glycine, serine and threonine metabolism
rle00460  Cyanoamino acid metabolism
rle00630  Glyoxylate and dicarboxylate metabolism
rle00670  One carbon pool by folate
rle00680  Methane metabolism
rle01100  Metabolic pathways
rle01110  Biosynthesis of secondary metabolites
rle01120  Microbial metabolism in diverse environments
rle01200  Carbon metabolism
rle01230  Biosynthesis of amino acids
rle01240  Biosynthesis of cofactors
Module
rle_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:rle00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    RL1620 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    RL1620 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RL1620 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    RL1620 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    RL1620 (glyA)
Enzymes [BR:rle01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     RL1620 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: CAK07115
RhizoBase: RL1620
UniProt: Q1MIU5
Position
1693675..1694973
AA seq 432 aa
MTNASTESFFNRSLADVDPDIFGAIGKELGRQRHEIELIASENIVSRAVLEAQGSIMTNK
YAEGYPGKRYYGGCQFVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGD
TFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVARKAEETKPKLIIAG
GTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGVHPSPFPHCHVATTTTHKSLRG
PRGGVILTNDEDLAKKFNSAVFPGLQGGPLMHIIAAKAVAFGEALQPEFKDYAAQVVKNA
KALAETLISGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEK
PFVTSGVRLGAPAGTTRGFKEAEFREIGNLIVEVLDGLKVANSDEGNAAVEAAVRGKVVS
LTDRFPMYGYMG
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgaccaatgcttccaccgaatccttcttcaatcgctcgcttgcggacgtcgatccggat
attttcggcgcgatcggaaaggaactcggtcgccaacggcacgagatcgaactgatcgct
tctgagaacatcgtctcccgcgccgtgctggaagcccagggctccatcatgaccaacaaa
tatgccgagggttatcccggcaagcgttattacggcggctgccagttcgtcgatatcgcc
gaggaactggcgatcgagcgcgccaagaagctgttcggcgtcaatttcgccaacgtccag
ccgaattccggttcgcagatgaaccaggccgtgttcctggcgctgctgcagcccggcgat
accttcatggggctcgacctgaattcaggcggccacctcacgcatggttcgccggtcaac
atgtccggcaagtggttcaacgtcgtctcctacggcgtgcgcgaaggcgacaacctgctc
gacatggatgaagtcgcccgcaaggccgaggaaaccaagccgaagctcatcatcgccggc
ggcactgcctattcccgcatctgggactggaagcgcttccgcgagatcgccgacagcgtc
ggcgcttatctgatggtcgacatggcccacatcgccggcctcgttgccggtggtgttcat
ccgtcgccattcccgcattgccatgtcgcgacgacgacgacccacaagtcgctgcgcggc
ccgcgcggcggcgtcatcctcaccaatgacgaggatctggcgaagaagttcaattcggcg
gtcttccccggtctgcagggcggcccgctgatgcacattatcgccgccaaggctgtggcc
ttcggcgaggcgctgcagcctgagttcaaggattatgccgcccaggtggtcaagaacgcc
aaggcgcttgccgaaacgctgatatcgggcggcctcgacgtcgtctccggcggcaccgac
aaccacctgatgctggtcgacctgcgcaagaagaatgccaccggcaagcgcgccgaggca
gccctcggccgcgcttacgtcacctgcaacaagaacggcattcccttcgatccggaaaag
cccttcgtcacctcgggtgtgcgcctcggcgcaccggccggcacgacccgcggcttcaag
gaagcggaattccgcgagatcggcaatctgatcgtcgaggtcctcgacggtctgaaggtc
gccaattccgatgaaggcaacgccgcggtcgaagccgccgtgcgcggcaaggtggtcagc
ctcaccgaccgcttccccatgtacggctacatgggataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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