KEGG   Rhizobium johnstonii: RL4418
Entry
RL4418            CDS       T00402                                 
Symbol
xynB
Name
(GenBank) putative beta-xylosidase
  KO
K01198  xylan 1,4-beta-xylosidase [EC:3.2.1.37]
Organism
rle  Rhizobium johnstonii
Pathway
rle00520  Amino sugar and nucleotide sugar metabolism
rle01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rle00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00520 Amino sugar and nucleotide sugar metabolism
    RL4418 (xynB)
Enzymes [BR:rle01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.37  xylan 1,4-beta-xylosidase
     RL4418 (xynB)
SSDB
Motif
Pfam: Glyco_hydro_39 DUF4334
Other DBs
NCBI-ProteinID: CAK09904
RhizoBase: RL4418
UniProt: Q1MAY1
Position
4698519..4700123
AA seq 534 aa
MSSPYDVTISVHANRPTGKYEPLWNWFGYDEPNYTYSPHGRKLLKELTELSPEPPRIRAH
NLLTSGDGLPALKWGSTNAYTEDANGNPVYDWAIIDKIFDTYVEAGNIPLIQIGFTPEAL
SDFDGPYRHQWEPADKYATITTGWTAPPTDLKKWGDLIEAWARHLAERYGEDVVSSWPWE
VWNEPDGHYWTGTIPQFCEMYDVSAKALKRALPKARVGGPHTCGAFANEKAQTFLRAFLK
HVVDNKSPIDFLAFHAKGNPVIYEGHVRMGLHKQLRDIETNLAIINEFPELRHLPVVIGE
SDPEGCAACSARVHPQNGYRNGPLYGVYVVESMIRTYELARRANIHIEGAVTWAFLFDDQ
PYFDGFRDLATNGVDKAVLNGFRMLGKLGGEWLESESDYRRDIEDIMSHGVRGKPDVNVV
ATRDDKGVSILVWHYHDDDEAGPSADITVNLDGWGDKSASLRHFRMDEEHSNAFGVWKAM
GKPQNPAAEDYARLEASGQLAEIGGQASVKVDDGKIALKVSLPRQGVSLLRLDW
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgagcagcccctatgacgtgacaatctccgttcacgccaaccggccgaccggcaaatac
gaacctttgtggaactggttcggttacgacgagccgaactacacttactccccgcacggc
aggaagctgctcaaggaactgacagagctcagccccgagccgccccgtatccgcgcgcac
aatcttctgaccagcggcgatggcctgcctgccctcaaatggggttcgaccaatgcctat
accgaggatgcgaacggcaatccggtctatgactgggcaatcatcgacaagatcttcgac
acctatgtcgaagccggcaacattccgctgattcagatcggcttcacgcccgaagcgctc
tccgacttcgacggcccttatcgccaccaatgggagccggccgacaaatacgcaacgatt
accaccggttggacggccccgccgacggacctgaagaaatggggcgacctgatcgaagca
tgggcgcgccatctggccgaaagatatggcgaggacgtcgtttcaagctggccatgggaa
gtgtggaacgagccggacggtcactactggaccggcaccatcccgcaattttgcgagatg
tatgacgtcagcgccaaggccttgaagcgcgcgcttccgaaggcccgcgtcggcgggccg
cacacctgcggcgcctttgccaatgaaaaagcccagacctttctgcgcgccttcctcaag
cacgtggtcgacaacaagtcgccgatcgatttcctcgccttccacgccaagggcaatccg
gtgatctacgagggtcacgtgcggatgggcctgcacaagcagctccgcgacatcgagacg
aaccttgccatcatcaatgagtttccggaactccgccacctgcccgtggtgatcggcgaa
tccgatccggaaggctgtgccgcctgctccgcacgcgtccatccgcagaacggctatcgc
aacggcccgctctacggcgtctatgtcgtggaaagcatgatccgcacctatgagctagca
agacgcgccaacatccatatcgaaggcgcggtcacctgggccttcctcttcgacgaccag
ccctatttcgacggcttccgcgatcttgccaccaacggcgtcgacaaggctgtcctcaac
ggcttccgcatgctcggcaaactcggcggcgaatggctggaatcggaaagcgattatcgc
cgtgatatcgaagatatcatgagccatggcgttcgcggcaagcccgatgtcaacgtcgtg
gcgacccgcgacgacaagggcgtctccattctcgtctggcattaccacgacgatgatgaa
gccgggccgtccgcagacatcacggtcaatctcgacggctggggcgacaaatccgcctcg
ctcaggcatttcaggatggacgaggagcattccaatgcctttggcgtctggaaagcgatg
ggcaagccgcagaatccggccgccgaagactatgccaggctggaggcctcgggacagctc
gccgagatcggcggtcaggcgtcggtcaaggtcgatgacggcaagatcgccctcaaggtc
tccctaccgcgtcaaggcgtgtctctcctgcgcctcgattggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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