KEGG   Rhizobium johnstonii: RL4580
Entry
RL4580            CDS       T00402                                 
Name
(GenBank) putative ATP-binding component of ABC transporter
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
rle  Rhizobium johnstonii
Pathway
rle02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rle00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RL4580
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rle02000]
    RL4580
Transporters [BR:rle02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    RL4580
SSDB
Motif
Pfam: ABC_tran oligo_HPY SMC_N AAA_21 AAA_16 AAA_22 AAA_29 NACHT RsgA_GTPase PRK AAA_25 AIG1 DUF87 ABC_ATPase CbiA AAA Spheroidin
Other DBs
NCBI-ProteinID: CAK10063
RhizoBase: RL4580
UniProt: Q1MAH5
Position
4861075..4862913
AA seq 612 aa
MSDVSSASASPVLSVRNLTTSFLVDGDWKPVVRDVSFEVMPGETVAIVGESGSGKSVTSL
SIMRLLAKGSSRIDGAISLNGKDVLTLPEKEMRQVRGNDAAMIFQEPMTSLNPIFTIGRQ
ISEALTCHGDIGKAEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASR
PKLLIADEPTTALDVTIQGQILDLIKMLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGE
AVETGTTDDIFHRGRHPYTRALLSAVPRLGSMADRKWPLRFPVVDTATGERREPVEVADT
VDRRRTPILEVKNLVTRFDIRGGLLGRKTGAIHAVEDVSFDLFQGETLSLVGESGCGKST
TGRSITRLVQPNGGSVSLDGYDVLSLDAVSLRRMRRSIQMIFQDPFASLNPRMTVGAAVA
EPITEHGLGTGAQAREKAADLLERVGLKPDMMKRYPHEFSGGQRQRICIARALALDPKVI
VADESVSALDVSIKAQVCNLLMDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEI
GPRAELFSNPQHAYTKKLMAAVPVPDPSRRGIKRNLGTDELKSPVRPVGYVAPPRRYREV
SAGHLVRLDEAA
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgagtgatgtttcttcagcctccgcctccccggttctttccgtccggaacctgacgacc
tccttcctcgtcgacggcgactggaagccggtggtgcgcgacgtctccttcgaggtcatg
cctggcgagacggtggcgatcgtcggcgaaagcggctcgggcaagagcgtcacctccctt
tcgatcatgcgattgctcgccaagggatcgagccgcatcgacggcgccatcagcttgaac
ggcaaggatgttctcacccttccggaaaaggagatgcgccaggtgcgcggcaacgacgcc
gccatgatcttccaggagccgatgacatccctcaacccgatcttcaccatcggccgccag
atctccgaagcgctgacctgccacggtgatatcggcaaggccgaggcgcgggccgaaacc
gtgcgcctgctggaaaaggtccgcatcccgaacgccgcctcgcgcttcgacgaatatccg
caccagttctcgggcggcatgcgccagcgcgtgatgatcgccatggcgctcgccagccgg
ccgaaattgctgatcgccgacgagccgacgacggcgctcgacgtgacaatccagggccag
atcctcgacctgatcaagatgctgcaggaagaagagggcatgtcggtgctctttatcacc
cacgacatgggcgtcgtcgccgaaatcgctgaccgcaccatcgtcatgtatcgcggcgag
gcggtggaaaccggcacgaccgacgacatcttccatcgcggcaggcatccctatacccgc
gcactgctctcggccgtgccgcgcctcggctcgatggccgaccggaaatggccgctgcgt
ttcccggtcgtcgataccgcgaccggcgaacgccgcgaaccggtcgaggtggccgacacc
gtcgaccgccgccggacgccgatcctcgaagtcaagaacctcgttacccgtttcgatatc
cgcggcggcctactcggccgcaagaccggcgcgatccatgcggtcgaggacgtctccttc
gatctcttccagggcgagacgctgtcgctcgtcggcgaatccggttgcggcaaatcgacc
accggtcgctcgatcacccgcctcgtccagccgaacggcggcagtgtcagcctcgacggc
tatgacgtgctgagccttgacgcggtcagtctcagacggatgcgccgcagcatccagatg
atctttcaggaccccttcgccagcctcaacccgcgcatgaccgtcggcgccgccgtcgcc
gaacccatcaccgaacatggcctcggcaccggcgcccaggcccgcgaaaaggcggccgat
cttctcgaacgcgtcggactgaaacccgacatgatgaaacggtatccgcacgaattctcc
ggcggtcagcgccagcgcatctgcattgcccgagcgctcgcactcgatccaaaggtgatc
gtcgccgatgaaagcgtttcggccctcgatgtgtcgatcaaggcgcaggtctgcaatctg
ctgatggacctgcagcaaagcctcaacctcgccttcctgttcatttcccacgacatggct
gtggtcgagcgcgtcagccatcgggtcgcggtgatgtatctcggcgaaatcgtcgagatc
ggcccgcgcgcggaattgttcagcaatccacagcacgcctacacgaagaagctgatggca
gccgtgcccgtccccgacccctcgcggcgcggcatcaagcgcaacctcggaaccgacgag
ctcaagagccccgttcgcccggttggctacgtcgcaccgccgcgccgatatcgggaagtg
tcggcaggtcatctggtgcggctcgatgaagccgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (27)   

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