KEGG   Rhizobium johnstonii: pRL120642
Entry
pRL120642         CDS       T00402                                 
Symbol
groLp12
Name
(GenBank) putative 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rle  Rhizobium johnstonii
Pathway
rle03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rle00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    pRL120642 (groLp12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rle03019]
    pRL120642 (groLp12)
   03110 Chaperones and folding catalysts [BR:rle03110]
    pRL120642 (groLp12)
   03029 Mitochondrial biogenesis [BR:rle03029]
    pRL120642 (groLp12)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rle04147]
    pRL120642 (groLp12)
Enzymes [BR:rle01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     pRL120642 (groLp12)
Messenger RNA biogenesis [BR:rle03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     pRL120642 (groLp12)
Chaperones and folding catalysts [BR:rle03110]
 Heat shock proteins
  HSP60 / Chaperonin
   pRL120642 (groLp12)
Mitochondrial biogenesis [BR:rle03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    pRL120642 (groLp12)
Exosome [BR:rle04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   pRL120642 (groLp12)
  Exosomal proteins of other body fluids (saliva and urine)
   pRL120642 (groLp12)
  Exosomal proteins of breast cancer cells
   pRL120642 (groLp12)
  Exosomal proteins of colorectal cancer cells
   pRL120642 (groLp12)
  Exosomal proteins of bladder cancer cells
   pRL120642 (groLp12)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: CAK12352
RhizoBase: pRL120642
UniProt: Q1M3H2
Position
pRL12:complement(696038..697666)
AA seq 542 aa
MAAKEIKFSTEAREKMLRGVDILANAVKATLGPKGRNVVIERSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTSDVAGDGTTTATVLAQAIVKEGAKAVTSGMNPMDLKRGI
DLAVGAIVAELKANARKISNNSEIAQVGTISANGDAEIGRFLAEAMERVGNDGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNADKMRVEFEDPYILIHEKKLSNLQSMLPVLEAV
VQSSKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTAGTV
ISEDLGIKLESVTLDMLGRAKKVSIEKENTTIVDGSGAKSDIEGRVAQIRAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALL
RAVKALDNVETANGDQRVGVDIVRRAVEAPARQIAENAGAEGSVIVGKLREKSEFSYGWN
AQTGEYGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAMIAEKPRKDAPPPMPAGHGM
DF
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggctgctaaagaaatcaaattcagcaccgaagctcgcgagaagatgctgcgtggcgtc
gacatcctggccaacgccgtgaaggcgaccctcggcccgaaaggccgcaacgtcgtgatc
gaaaggtctttcggcgcgccgcgcatcaccaaagacggcgtttccgtcgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgtgaagttgcttcgaag
accagcgacgtcgccggcgacggcaccacgactgcaacggtgctggcccaggcgatcgtc
aaggagggcgccaaggcggtgacttcgggcatgaacccgatggatctgaaacgcggcatc
gatcttgcggtcggcgccatcgtcgcggaactgaaggccaacgcccgcaagatctccaac
aattccgagatcgcccaggtcggcacgatctccgccaatggcgatgccgaaatcggccgt
tttttggcggaagccatggaaagggtcggcaatgatggcgtcatcaccgtcgaggaagca
aagactgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctatctc
agcccctacttcgtgaccaatgccgacaagatgcgggtcgagttcgaagacccttatatc
ctcatccacgagaagaagctctcgaacctgcagtcgatgctgccggttctggaagccgtc
gtccaatccagcaagccgctgctcatcatcgctgaagacgtcgaaggcgaagctcttgct
accctcgtcgtcaacaagcttcgcggtggcctgaaaatcgctgccgtcaaggcgcccggc
ttcggcgatcgtcgcaaagccatgctcgaagacatcgccatcctgactgccggcaccgtc
atctccgaagatctcggcatcaagctcgaatctgtcacgctcgacatgctcggccgtgcc
aagaaggtctcgatcgagaaggaaaacacgacgatcgtcgatgggtcaggtgccaagtcc
gacatcgaaggtcgcgttgcccagatcagggctcagatcgaagaaaccacctccgactat
gaccgcgagaagctgcaggagcgccttgccaagctcgccggcggcgttgccgtcattcgc
gtcggcggctcgacggaagtcgaagtgaaggaaaagaaggaccgcgtcgacgacgcgctt
catgcaacccgcgcggcggtcgaggaaggcattctaccgggcggcggcgtggcgctgctg
cgcgccgtcaaggcgctcgacaatgtcgagaccgccaatggcgaccagcgcgtcggcgtc
gacatcgttcgccgcgcggtcgaggcgccggctcgccagatcgccgaaaacgccggagcg
gaaggctcggtcatcgtcggcaagctgcgcgagaaaagcgagttctcctacggctggaac
gcgcagacgggcgaatatggcgacctctatgcgcagggcgtcatcgatccggccaaggtg
gttcgcaccgcgctgcaggatgcggcctccatcgccggccttctcgtcacgacggaagcc
atgatcgccgagaaacccaggaaggacgcgccgccgccaatgcccgccggccacggcatg
gacttctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system