KEGG   Rhizobium johnstonii: pRL80136
Entry
pRL80136          CDS       T00402                                 
Symbol
trbFp8
Name
(GenBank) putative transmembrane conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
rle  Rhizobium johnstonii
Pathway
rle02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rle00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    pRL80136 (trbFp8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rle02044]
    pRL80136 (trbFp8)
Secretion system [BR:rle02044]
 Type IV secretion system
  Trb secretion system protein
   pRL80136 (trbFp8)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: CAK02936
RhizoBase: pRL80136
UniProt: Q1M985
Position
pRL8:complement(140152..140814)
AA seq 220 aa
MAGHPAPENPYLAARQEWSERYGSYVRAASAWKVVGILSLGMAVIGFGYALYLSTQVKLV
PYIVEVDKLGNTVSGGFPQQIEYADTRVVRATLGNFVTSFRSITPDAVVQKQYIDRTYAL
LRTSDPSTQKVNAWFRGNSPFEKAVNATVAIEVNNIVALSNQTFQIDWTEYERDRKGKEV
ATRRFRGIATVSITSPQDEATIRLNPIGVYVTDFDWTAQL
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcatcccgcacctgagaacccgtaccttgctgcaaggcaggaatggtcagaa
cgttacggctcctacgtcagggcggcgtccgcctggaaggtcgttggaatcttgagcctg
ggaatggccgtgattggctttggctacgcgctttacctcagtacgcaggtcaaactcgtc
ccgtatatcgtcgaggttgataagctcgggaacacggtttccgggggcttcccgcagcag
atcgagtatgcggacacgcgggtcgtgcgcgcgacgctcgggaacttcgtgaccagcttt
cgttcgatcacaccagatgcggtggtccagaagcaatatatcgaccgcacctatgccctc
ctgcggacgagcgatccctcgacgcaaaaggtcaatgcatggttccgcggcaactcgccg
ttcgaaaaggcggtcaacgcgaccgtcgcgatcgaggtgaacaacatcgtcgcgctttcg
aaccagaccttccagatcgactggaccgagtacgagcgcgatcggaaaggcaaggaggtc
gcgacccgacgtttccggggcatcgcgaccgtgtcgatcacatcaccacaagacgaagca
acaatccggctcaatccgatcggcgtgtacgtgaccgatttcgactggaccgcgcaactt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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