KEGG   Rhizobium johnstonii: pRL80138
Entry
pRL80138          CDS       T00402                                 
Symbol
trbJp8
Name
(GenBank) putative conjugal transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
rle  Rhizobium johnstonii
Pathway
rle02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rle00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    pRL80138 (trbJp8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rle02044]
    pRL80138 (trbJp8)
Secretion system [BR:rle02044]
 Type IV secretion system
  Trb secretion system protein
   pRL80138 (trbJp8)
SSDB
Motif
Pfam: DUF2749 ANAPC4 Fib_alpha SCF MCPsignal iSTAND COG3_N
Other DBs
NCBI-ProteinID: CAK02938
RhizoBase: pRL80138
UniProt: Q1M983
Position
pRL8:complement(142208..143017)
AA seq 269 aa
MSEAIQFLKLGKSLVVGLVAAGLTATPTVSYAGGAVTGATEMTQLLNNGELISLVGQSSE
QIANQITQITQLAEQIQNQLNIYQNMLQNTAQLPNHIWGQVEGDLNQLRDIVNQGQGIAF
SMGNADDLLKQRFKSYADLKTSLPNAESFSSTYQTWSNTNRDTISSTLKAASLTADQFDS
EEDTMGQLQSMSQSADGQMKALQVGHQIAAQQVAQIQKLRGIVSQQTTMMGTWLQSEQTD
KDLAQARREKFFNADVQSIPSGQKMEPRW
NT seq 810 nt   +upstreamnt  +downstreamnt
atgagtgaagcaatccagttcttgaagctcggcaaatcattggtggtgggattggtcgcc
gccggccttaccgccacgcccactgtttcctatgcaggaggcgcagttaccggcgcgacc
gaaatgacgcagctcttgaacaacggcgagctgatatctttggtcgggcaatcgagcgag
cagatcgcaaatcagatcacccagattacccagcttgccgagcagatccaaaaccagctc
aatatctatcaaaacatgctgcagaatacggcccagcttccgaaccatatctggggccag
gttgaaggtgacctgaaccagctgcgcgatatcgtcaatcagggtcagggcatcgccttt
tccatgggcaacgctgacgatcttctgaagcaacgcttcaaaagctatgcggacttgaag
acaagcctgccaaacgccgagagcttttcgtccacctatcagacgtggtcgaacacgaac
cgcgacacgatttccagcactctcaaggccgcaagcctcaccgccgatcagttcgacagc
gaagaggatacgatgggccaactgcaatcaatgtcgcaatcagcggacggccagatgaag
gcacttcaggtcggccaccagatcgccgctcagcaggtcgcccagatacagaagctacgc
ggaattgtctcccagcagaccacgatgatggggacctggctgcagagcgaacagacggac
aaggatctggcgcaggctcgtcgagagaaattcttcaatgcggacgtccaatccattccc
tccggtcagaaaatggagccccgctggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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