KEGG   Rhizobium johnstonii: pRL80140
Entry
pRL80140          CDS       T00402                                 
Symbol
trbDp8
Name
(GenBank) putative conjugal transfer protein TrbD
  KO
K20529  type IV secretion system protein TrbD
Organism
rle  Rhizobium johnstonii
Pathway
rle02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rle00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    pRL80140 (trbDp8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rle02044]
    pRL80140 (trbDp8)
Secretion system [BR:rle02044]
 Type IV secretion system
  Trb secretion system protein
   pRL80140 (trbDp8)
SSDB
Motif
Pfam: VirB3 Glucos_trans_II TMEM210 Halogen_Hydrol
Other DBs
NCBI-ProteinID: CAK02940
UniProt: Q1M981
Position
pRL8:complement(145456..145755)
AA seq 99 aa
MADAGVGLHRNRIHRALSRPNLLMGADRELVLLTGLAAIILIFVVLTIYSALFGIAIWIV
VVGALRMMAKADPMMRKVYARHMRYRAHYLPTSAPWRRY
NT seq 300 nt   +upstreamnt  +downstreamnt
atggctgacgccggcgtcggactccatcgcaaccgtattcaccgtgctctctcgcgaccg
aacctcttgatgggagcggatcgagaactcgtgctgctgaccgggctcgccgcgatcatc
ctcatcttcgtcgtcctgaccatctactcggcacttttcggcatcgcgatctggatcgtg
gtcgtcggcgcgctccgcatgatggcgaaggcggaccccatgatgcgcaaagtctatgca
cgccatatgcggtaccgggcgcactacctcccgacctccgcgccctggcgccggtactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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