KEGG   Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_3221
Entry
Rleg2_3221        CDS       T00779                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
rlt  Rhizobium leguminosarum bv. trifolii WSM2304
Pathway
rlt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rlt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Rleg2_3221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rlt03400]
    Rleg2_3221
Enzymes [BR:rlt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Rleg2_3221
DNA repair and recombination proteins [BR:rlt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Rleg2_3221
    RecFOR pathway proteins
     Rleg2_3221
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_14 AAA_3 Rad17 AAA_22 AAA_2 AAA_16 nSTAND3 ResIII AAA_17 AAA_28 AAA_18 RNA_helicase DUF815 TsaE AAA_33 NTPase_1 IstB_IS21 AAA_24 NB-ARC ABC_tran Sigma54_activ_2 AAA_7 Bac_DnaA Cytidylate_kin NACHT PduV-EutP
Other DBs
NCBI-ProteinID: ACI56488
UniProt: B5ZP80
Position
3308122..3309162
AA seq 346 aa
MSEPARLISPEKRGEDLDITLRPQSLDEFTGQAEARANLKVFIEAAKNRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVRLS
FYTVEELELIVRRGARLMNLPITEEGAREIARRARGTPRIAGRLLRRVRDFAEVARAEAV
TREIADEALTRLLVDNVGFDQLDKRYLNMIAVNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYMIQQGFIQRTPRGRVLTAIAWKHLGMQPPKEMEAAQFRLFQEDN
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgagcgaacccgcccgcctgatatcgccggaaaagcggggcgaagatctcgacatcacc
ttgcgcccgcaatcgctggacgaattcaccggccaggcggaagcgcgcgccaatctcaag
gtcttcatcgaggcggcgaagaatcgcggcgaggcgctggaccatgtgctcttcgtcggc
ccgcccggcctcggcaagacgacgctggcgcagatcatggcgaaggaactcggcgtcaat
ttccgctcgacgtcaggtcccgtgattgccaaggccggcgatctcgccgcgctgctcacc
aatctcgaggagcgcgacgtgctcttcatcgacgagatccatcgcctcaacccggctgtc
gaggaaattctctatccggccatggaagatttccagctcgacctgatcatcggcgaaggc
cccgccgcccgctcggtgaaaatcgatctgtcgaaattcaccctggtggcggccaccacc
cgcctcggcctgctgacgacgccgctgcgcgaccgtttcggcatcccggtgcgcctgagc
ttttataccgtcgaggagctggaattgatcgttcgccgcggcgcgcggctgatgaaccta
ccgataaccgaagagggcgcccgcgaaatagcaagacgcgcccgcggcacaccgcgcatc
gccggccgtctgctgcggcgcgtgcgcgatttcgccgaggtggcaagggccgaggcggtg
acgcgtgagatcgccgacgaggcgctgacccgcttgctggtcgacaatgtcggcttcgac
cagctcgacaaacgttacctcaacatgatcgccgtcaatttcggcggcggcccggtcggc
atcgaaaccatcgccgccggcctttccgagccgcgtgacgcgatcgaggacatcatcgag
ccttatatgatccagcagggtttcattcagcgcacgccacgcggccgtgttctgaccgca
atcgcgtggaaacatctcggaatgcaaccgcccaaggaaatggaggctgcgcagttccgg
ctgttccaggaggacaactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (33)   
   Pfam (33)   
All databases (44)   

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