KEGG   Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0306
Entry
Rmag_0306         CDS       T00438                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
rma  Candidatus Ruthia magnifica (Calyptogena magnifica)
Brite
KEGG Orthology (KO) [BR:rma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rma03032]
    Rmag_0306
   03400 DNA repair and recombination proteins [BR:rma03400]
    Rmag_0306
Enzymes [BR:rma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Rmag_0306
DNA replication proteins [BR:rma03032]
 Prokaryotic type
  DNA Topoisomerases
   Rmag_0306
DNA repair and recombination proteins [BR:rma03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Rmag_0306
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: ABL02084
UniProt: A1AVX7
Position
330299..332884
AA seq 861 aa
MSEHTENPTHFKPNLPVVTIEDEMRNSYLEYAMSVIVGRALPDVRDGLKPVHRRVLYAME
VLGNDYNKSYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRNILIDGQGNFGSVD
GDSAAAMRYTEIRMAKLSHELLRDLEKNTVDFIDNYDGSESEPLVLPTRVPNLLANGSSG
IAVGMATNIPPHNLGEVIEACLKTIDNEDITIDELLEIMPGPDFPTAGIINGASGIRQAY
ETGKGKIYLRSVPHIEGEGEDKQSIVVTELPYQVNKAKLIGKIAKLVKDKRIDGITGLRD
ESDKDGMRMVIELRRGEVPEVMLNNLYKLTEMQTVFGINMVAIDKGMPKLMTLKNILEAF
IAHRRDVVTRRSIFDLNKARNHAHLLEGLAVALHNIDDIIELIKSASNSIDAKEVLVAKT
WQGSVIKELIGDRDMVMFKPEDLPTELGLQMDGDYQLSQKQVQAILDLKLHRLTGLEKNK
IFDEFNELLERIKYLLDILQTPERLMQVIREELIDIQSNYANARMTQILEHKIDLTLEDL
ITQERRVVTLSHGGYVKAQSLSDYQAQRRGGKGKVATKVKDEDFVDQLFIANSHDTVLCF
SSLGKVYWLKVYELPMASRIARGKPIVNLLPLEKEEIINAILTVSKFDENHFVFMVTSSG
TCKKTVLTNFSKPRKGGIIAIELKDNDQLIGVEITSGEHDIMLFSANGKSIRFKESDVRV
VGRTAIGVRGIKLANADKVVSLIVVNQDNPILTTTEKGFGKRTRLNEYRSQARGGLGVIS
IKTSDRNGKVVGAIQITDEDEMMLISNKGTLVRARAVDVSIIGRNTQGVTLINIIKGEKL
VSIAKIAEIEDEESEGENSIE
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgtctgagcatactgaaaatcccactcatttcaagccaaatttaccggtagttaccatt
gaagatgagatgcgtaactcctatttggaatacgcaatgagtgttattgttggacgtgca
ttgcctgatgttcgagacgggcttaagcctgtacatcgtcgcgtactttacgccatggag
gttctgggtaatgattataataagtcttataaaaaatcagcccgtattgttggtgatgtg
attggtaaatatcatccacatggtgatactgctgtgtatgacactattgtacgtatggcg
caaccattttcaatgcgcaatattttaattgatggccaaggtaactttggctcagttgat
ggtgattcagctgctgccatgcgctatacagaaattcgcatggccaaactttcgcatgag
ttattgagggatttagaaaaaaataccgttgactttattgacaattatgacggttcagaa
tcagaacctttagtattgccaacgcgtgtacctaatcttttagccaatggctcatcaggc
atcgcagtcggtatggcgactaacattccacctcataatttgggtgaagtgattgaggct
tgtttgaaaaccattgataatgaagatatcactattgatgaattgttggaaatcatgcca
ggtccagattttccaacagcaggtattattaatggtgcaagtggtattcgccaagcctat
gagactggtaaaggtaaaatttacttgcgttcagtaccccatattgaaggcgaaggcgaa
gacaagcaaagtattgttgtgaccgaattgccttatcaagttaataaagccaaactaatt
ggtaaaattgcaaaacttgttaaagataaacgcattgatggtatcactgggcttcgtgat
gagtctgataaagatggtatgcgcatggtgattgagttacgtcgtggagaagttccagaa
gtgatgcttaataatttgtataagctgactgaaatgcaaactgtattcggtattaatatg
gtggcgattgataaaggcatgccaaagttaatgacactaaaaaacattctagaggcattt
attgctcatagacgtgatgtagtgactcgtcgctctatttttgatttaaacaaagccaga
aatcacgcacatttattagaaggtttagcagttgcactgcataatattgatgacattatt
gaactgattaaatctgcttcaaactcgatagacgcaaaagaagtattagtggctaaaact
tggcaaggatcagtgattaaagagctgattggcgatcgtgatatggtaatgtttaagcca
gaagatttgccaacagagttaggcttgcaaatggatggtgattatcaattatcacaaaaa
caagtacaagctatcttagatttaaaacttcatcgcttaacagggcttgaaaaaaacaag
atttttgatgaatttaatgagctattagagcgtattaaatatctattggatattttacaa
acacctgaaagactcatgcaagttatccgtgaagagttaatagacattcaaagtaactac
gctaacgctcgtatgacacaaattttagaacacaagattgatttaacgcttgaggattta
attacccaagagagacgtgtagtcaccttatctcatggtggttatgtgaaagcacaatct
ttaagtgattatcaagctcagcgtcgtggtggcaaaggtaaagtagctactaaagtaaaa
gatgaagattttgttgatcagttatttattgccaattctcacgatacagttttgtgcttt
tcatccttaggaaaagtgtattggcttaaggtttatgagttaccaatggcatcacgcatt
gcacgtggtaagccaattgttaacttattaccattagaaaaagaagaaatcattaatgct
attttgacagtttcaaagtttgatgaaaatcattttgtttttatggtaactagtagtggt
acgtgtaaaaaaacagtactcactaacttctcaaaaccacgcaaaggtggcattattgcc
atagaattaaaagataacgaccaacttattggcgtagaaattacctctggtgagcatgat
attatgctattttcagccaatggtaaatccattcgatttaaagaatcagatgtccgtgtc
gtagggcgtacagccattggcgtacgtggtattaaattagcaaatgctgataaagtagtg
tctcttattgttgtcaatcaagataatccaattctaacaacaactgaaaaaggttttggt
aaacgcacgcgtcttaatgaatatcgctctcaagcacgaggtggtttaggtgttatttct
attaaaacctcagatagaaacggaaaagttgttggtgctattcagataactgatgaagat
gagatgatgttaatttccaacaaaggtactttagtccgtgctagagcagttgatgtttct
atcattggtcgtaatactcaaggcgtaaccttgattaatattatcaaaggtgaaaaatta
gtctctattgcaaaaattgctgagatagaagacgaggaatctgaaggtgaaaatagcata
gaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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