KEGG   Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0332
Entry
Rmag_0332         CDS       T00438                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rma  Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rmag_0332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rma03400]
    Rmag_0332
Enzymes [BR:rma01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rmag_0332
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rmag_0332
DNA repair and recombination proteins [BR:rma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Rmag_0332
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: ABL02109
UniProt: A1AW02
Position
complement(357580..358389)
AA seq 269 aa
MPELPEVEITKRGLVPLIINQEVSRVILHRENLRWAIPKNLITILANQKIKTIKRRAKYL
LIKFEAGTLIIHLGMSGSIKVVDIKTPLLKHEHFELQFNNGTSMRLNDPRRFGAVLFSKD
GSHKLLDSLGVEPLEAVFNNGYLYQKSRNKRKNIKDFIMDSKIVVGVGNIYACESLFMAS
INPQRKAGNVSKTRYKILTQCIKDILTQAIKAGGTTLQDFSQVDGNPGYFTQTLSVYGCE
NKTCHFCKSKIIKIVQNQRSTFYCRKCQT
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcctgaacttccagaagtagaaatcactaaacgtgggcttgtacctttaattatcaat
caagaagtgagccgagtaatactacatagagaaaatttgcgttgggctatacctaaaaat
ttaataacaatattggctaatcaaaaaattaagacaattaagcgtcgtgctaaatactta
ttgattaaatttgaggcgggtacgttaattatccatttaggtatgagtggctcaattaag
gtggttgatattaaaacaccactactcaagcatgaacattttgaattacaatttaacaat
ggtacaagtatgcgcttgaatgacccgagacgttttggtgcagtgctgttttcaaaagat
ggatcgcacaaattactagactcattaggggttgagcccttggaagcggtatttaataat
gggtatttatatcaaaaatcacgaaacaaacggaaaaatatcaaggattttattatggat
agtaaaatcgtagttggtgttggtaatatctatgcttgtgagagtttgtttatggcgagt
attaatccgcaacgtaaagcaggtaacgtgtctaagactcgatataaaatcttgactcaa
tgtattaaggatattttgactcaggccattaaagcaggcggcacaaccttgcaagatttt
tctcaagttgatggtaatcctggatatttcacacagactttgtctgtgtatggttgtgaa
aataaaacatgtcatttttgcaagagtaaaataattaaaattgtacaaaaccaacgatcc
acattctattgtagaaaatgtcagacttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (52)   

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