KEGG   Tritonibacter mobilis: K529_000890
Entry
K529_000890       CDS       T04367                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
rmb  Tritonibacter mobilis
Pathway
rmb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rmb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    K529_000890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rmb03021]
    K529_000890
   03400 DNA repair and recombination proteins [BR:rmb03400]
    K529_000890
Enzymes [BR:rmb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     K529_000890
Transcription machinery [BR:rmb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     K529_000890
DNA repair and recombination proteins [BR:rmb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      K529_000890
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Biotin_lipoyl_2 Peptidase_M23 Apocytochr_F_C RPOC_hybrid PTS_EIIA_1
Other DBs
NCBI-ProteinID: ANP39307
UniProt: A0A1B0ZYI7
Position
192511..196743
AA seq 1410 aa
MNQEITNNPFNPLTPPKVFDEIKVSLASPERILSWSYGEIKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLMLDMTLRDLERVLYFENYVVIEPGLTDLQYGQMMTEEEYMDAQDAYGMDAFT
ANIGAEAIREMLAAIDLEAEAEHLRAELAEATGELKPKKIIKRLKVVESFLESGNRPEWM
IMTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMILGLYYLTLAREGMKGEGMVFGNLDEVQHAL
DAGVVHLHSKVTVRVPQIDEEGNEVFQRFETTPGRARLGALLPKNAKAPFELVNRLLRKR
EVQQVIDTVYRYCGQKESVIFCDQIMTMGFREAFKAGISFGKDDMVIPDSKWTIVDDTRD
QVKDFEQQYMDGLITQGEKYNKVVDAWSKCNDKLTEAMMSTISAVKKAEDGSDMEPNSVY
MMAHSGARGSVTQMRQLGGMRGLMAKPNGDIIETPVISNFKEGLTVLEYFNSTHGARKGL
SDTALKTANSGYLTRRLVDVAQDCIVREHDCGTERAITAETAVNDGEVVASLGERILGRV
AADDVKRPGTEEIVVAAGQLIDERMADAIEEAGVQSMRIRSPLTCESEEGVCAMCYGRDL
ARGTMVNSGEAVGIIAAQSIGEPGTQLTMRTFHIGGVAQGGQQSFLEASQEGKIVFENTN
TLTNANGEVLTIGRNMKLIIQDEHGEERSSHKLGYGTKLFVKEGQQVKRGDKLFEWDPYT
LPIIAEKPGTAKYVDLVSGLAVREETDDATGMTQKIVIDWRAAPKGSDLKPEIILVGDDG
EPVRNSLGNPLTYPMSVDAILSCEDGQKIEAGDVVARIPREGAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGYVRFGRDYKNKRRISIEPADESMEAVEYMVPKGKHIPVVEGDFVQ
KGDYIMDGNPAPHDILSIMGVEALANYMIDEVQDVYRLQGVKINDKHIEVIVRQMLQKWE
ISDSGETTLLKGEHVDKQEFDAANEKALSRGKRPAQGEPILLGITKASLQTRSFISAASF
QETTRVLTEASVQGKKDKLVGLKENVIVGRLIPAGTGGATQQVRHIASSRDNVVLEARRE
EAEAAAALAAPMADDVADADFLVETPESRD
NT seq 4233 nt   +upstreamnt  +downstreamnt
atgaaccaggaaatcaccaataacccgttcaacccgctgaccccgccgaaggtctttgac
gagatcaaggtgtcgctggccagcccggaacggatcctctcgtggtcctacggcgagatc
aaaaagccggaaaccatcaactaccgtacgttcaagcccgagcgtgacggcctgttctgc
gcgcgtatctttggtccgatcaaagactacgaatgtctctgcggcaaatataagcgcatg
aagtatcgcggcgttgtctgcgagaaatgtggtgttgaagttacccttcaaaaagtgcgc
cgcgagcgcatgggccacatcgaactggccgcccccgttgcgcatatctggttcctgaag
tcgctccccagccggatcggcctcatgctggacatgaccctgcgtgatctggaacgcgtg
ctctacttcgaaaactacgttgtcatcgagccgggtctcaccgacctgcaatacggccag
atgatgaccgaagaagagtacatggacgcgcaagatgcctatggcatggacgctttcacc
gccaatatcggtgccgaagcgatccgcgaaatgctggcggcgatcgatcttgaggcagaa
gccgagcacctgcgcgccgaactggccgaggccaccggcgaactgaagcccaagaagatc
atcaagcgtttgaaagtcgtcgaatccttcctcgagtcgggcaaccgtcctgagtggatg
atcatgaccgtgatcccggtcattccgccggaactgcgtccgctggttccgctggatggg
ggccgttttgcgacctccgaccttaacgacctctatcgtcgggtgatcaaccggaacaac
cgtctgaagcgtctgatcgagctgcgcgcgcctgacatcatcgtccgcaacgaaaagcgg
atgctgcaggaatccgttgatgctctgttcgacaacggccgtcgtggtcgcgtcatcacc
ggtgccaacaaacgcccgctgaagtcgctctccgacatgctgaaaggtaagcagggtcgc
ttccgtcagaaccttttgggtaaacgcgtcgacttctccggtcgttcggtcattgtgacc
ggccccgagctgaagttgcaccagtgcggcttgcccaagaagatggcgctcgaactcttc
aagcccttcatctactcgcgtctggaggccaaaggtctgtcctccaccgtgaagcaggcg
aagaagctcgttgaaaaagagcgtcccgaagtttgggacatcctcgatgaggtgatccgc
gagcacccggtgatgctgaaccgcgcaccgacgctgcaccgtcttggtattcaggcgttc
gaacccacgctgatcgaaggtaaagcgatccagctgcacccgctggtctgttcggcgttc
aacgcggacttcgacggtgatcagatggctgtgcacgtcccgctgagccttgaggcccag
ttggaagcgcgcgtcctgatgatgtccacgaacaacgttctgtcgcctgcaaacggcgcg
ccgatcatcgttccctcgcaggatatgattcttggcctttactacctcacgctggcgcgt
gaaggcatgaagggcgagggcatggtctttggtaacctcgatgaagttcagcacgcgctg
gacgctggtgttgtgcatctgcactccaaagtcaccgttcgggttccgcagatcgacgaa
gagggcaacgaggtcttccaacgctttgagaccactccgggccgtgcccgtcttggtgcg
ttgctgccgaaaaacgccaaggcaccgtttgaactggtgaaccgtctgctgcgcaaacgt
gaagttcagcaggtcatcgacaccgtctaccgctactgcggtcagaaagagtccgtgatc
ttctgtgaccagatcatgaccatgggcttccgcgaggcgttcaaggcgggcatctcgttc
ggtaaggacgacatggtgatcccggattccaagtggaccatcgtcgacgacacccgcgat
caggttaaagactttgaacagcagtacatggacggcctgatcactcagggcgaaaagtac
aacaaggtcgtggatgcctggtcgaagtgtaacgacaagctcaccgaagccatgatgtcc
accatttcggcggtcaaaaaggcagaagacggctccgacatggaaccgaactcggtctac
atgatggcccactccggtgcgcgtggctccgtgacgcagatgcgtcagctgggcgggatg
cgtggtctgatggcaaagccgaacggcgacatcatcgagaccccggttatctcgaacttt
aaagaaggcctgaccgttctggagtacttcaactccacccacggtgcccgtaagggtctg
tcggatacggcgcttaagactgcgaactccggttacctgacccgtcgtcttgtggacgtg
gcgcaggattgcatcgtgcgtgagcacgactgtggtaccgaacgtgcgatcactgcagag
actgcggtcaatgatggtgaggttgtggcctccctcggcgagcgtattctgggtcgtgtt
gccgcggatgatgtcaaacgtccgggcaccgaagagatcgtggtcgccgctggtcagttg
atcgacgaacgcatggcggacgcgatcgaggaagccggtgttcagtccatgcgcatccgc
agcccgctgacctgtgaaagcgaagagggcgtctgcgccatgtgctatggccgtgacctt
gcgcgcggtaccatggtcaactccggtgaggccgtcggcatcatcgcggcgcagtcgatc
ggtgaacccggtacacagctgacgatgcggaccttccacatcggcggcgtggcacagggt
ggtcagcagtccttccttgaggcgtcccaagagggcaagatcgtgttcgagaacacgaac
acgctcaccaacgccaacggcgaagttctgaccattggccggaacatgaagctgatcatt
caagacgagcacggtgaagagcgctccagccacaagctgggctacggcaccaagctgttc
gtcaaggaaggccagcaggtcaagcgcggcgacaaactgttcgagtgggacccctatacc
ctgccgatcatcgccgaaaagccgggtactgcgaagtacgtggacctcgtgtccggtctg
gccgtgcgcgaagaaaccgacgatgccaccggcatgacccagaagatcgtgatcgactgg
cgtgcggcaccgaagggctctgacctgaagccggaaatcatccttgtgggtgatgatggc
gaaccggtccgcaattcccttggcaacccgctgacctatccaatgtccgtggatgcgatc
ctgtcctgtgaagacggtcagaagatcgaagccggtgacgttgttgcgcgtatcccgcgt
gaaggtgcgaagacgaaggacattaccggtggtctgccgcgtgtggccgaactcttcgag
gcgcgtcgtccgaaagatcacgcgatcatcgccgaaatcgatggttacgtgcgctttggt
cgcgactacaagaacaagcgtcgcatctccatcgagccggcagatgagtccatggaggcc
gtggaatacatggtgcccaagggcaagcacatcccggttgtcgaaggcgacttcgttcaa
aaaggcgactacatcatggacggcaacccggcgccgcatgacatcctgtccatcatgggt
gtcgaggctctggcgaactacatgatcgacgaagtgcaggacgtttatcgcctgcagggt
gtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcaaaagtgggag
atctccgactccggcgagaccacgctcctcaagggcgaacacgtcgacaagcaggagttc
gacgcggcaaacgagaaggcgctcagccgcggcaagcgcccggcacaaggcgagccgatc
cttcttggtatcaccaaggcgtcgttgcagacccgctccttcatctccgcggcctccttc
caggagaccacacgagtcctcaccgaggcttctgtgcaaggtaagaaggacaagctggtc
ggcctgaaggaaaacgtcatcgtcggtcgtctgatcccggcgggcaccggtggtgcaacc
cagcaggtgcgccacatcgcatcctcgcgcgacaatgtggtccttgaggcccgtcgcgaa
gaggccgaagcggcggcagcccttgcagcgccgatggcggatgatgttgcggatgcggat
ttcctcgtggaaaccccggaaagccgcgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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