KEGG   Rhopalosiphum maidis (corn leaf aphid): 113550181
Entry
113550181         CDS       T06065                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03030  DNA replication
rmd03410  Base excision repair
rmd03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113550181
   03410 Base excision repair
    113550181
   03450 Non-homologous end-joining
    113550181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmd03032]
    113550181
   03400 DNA repair and recombination proteins [BR:rmd03400]
    113550181
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rmd04147]
    113550181
DNA replication proteins [BR:rmd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    113550181
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     113550181
DNA repair and recombination proteins [BR:rmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     113550181
Exosome [BR:rmd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113550181
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5 HHH_2 UQCC2_CBP6 NAP DUF3560
Other DBs
NCBI-GeneID: 113550181
NCBI-ProteinID: XP_026807685
Position
1:2146617..2152044
AA seq 380 aa
MGITGLAKLIADIAPNAIKENEIKNHFGRKIAIDASMSLYQFLIAVRSEGAQLTSADGET
TSHIMGTFYRTIRLLENGIKPVYVFDGKPPQMKSSELEKRADRRQEAQKSLEKAEEAGDA
TGIDKFSKRLVKVTSIHMTECKELLKLMGVPFVEAPCEAEAQCAAMVKAGKVYATATEDM
DALTFGSPVLLRHMTFSEARKMPIQEFQLDSVLKTMEMSRDEFIDLCILLGCDYCNSIKG
VGPKRAIELMRQYRSLENIIENLDTKKYQVPENWPFKEARRLFIEPEIRDPETIDLKWMD
PDEEGLVKFLCGDRGFNEDRVRNGAKKLIKARSGTTQGRLDSFFAFSSTPNKRKAEEAKT
AAEASKKAKKGNYSKRGRPK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggtattactggtttagcgaaacttatagcggacattgctccaaatgccatcaaagaa
aatgaaattaaaaatcattttggccgaaaaattgcgattgatgcttcaatgagtctttat
cagtttttgattgcagttcgcagtgagggagcacaactgacaagcgctgatggtgaaact
actagtcatattatgggtacattctatcgtacaataagacttttagaaaatggtattaaa
ccagtatatgtatttgatggtaagccacctcaaatgaaatcatcagaattagaaaaacgg
gctgataggaggcaggaagcacaaaaatcattagaaaaagcagaagaagccggtgatgct
actggaattgacaaattcagtaaacgattggtaaaagtaacatcaattcatatgaccgaa
tgcaaagaactgctaaaattaatgggagttccttttgtggaagctccatgtgaagctgaa
gcacagtgtgctgctatggtaaaagctggtaaagtgtatgctactgctactgaagatatg
gacgccttaacatttggttctccagtgttactacgtcacatgacattcagtgaagccaga
aaaatgccaattcaagaatttcaattagattcagtgttaaaaacaatggaaatgtctaga
gatgaattcatagatctgtgtatactgttgggatgtgattactgtaacagtatcaaaggg
gttggaccaaaacgagctattgagttaatgcggcaatacagatcattagaaaacattatt
gaaaatttagatactaaaaaatatcaagtacctgaaaattggccatttaaggaagctaga
cggttatttattgaaccagagataagagatcctgaaactatagatctaaaatggatggat
ccagatgaagaaggattagtcaaatttttatgtggtgatagaggatttaatgaagataga
gtaagaaatggagctaagaagttaatcaaggcacgatctggtacaactcaaggcaggttg
gattcattttttgcattctcttcaacgccaaataaacgtaaagctgaggaagcaaaaaca
gcagcagaagccagcaagaaagcaaagaagggaaattacagcaaacggggtagaccaaaa
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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