KEGG   Rhopalosiphum maidis (corn leaf aphid): 113560502
Entry
113560502         CDS       T06065                                 
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    113560502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rmd03009]
    113560502
Ribosome biogenesis [BR:rmd03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    113560502
SSDB
Motif
Pfam: Utp12 WD40 ANAPC4_WD40 PQQ PorZ_N_b_propeller PQQ_3 WD40_2 RAB3GAP2_N PQQ_2
Other DBs
NCBI-GeneID: 113560502
NCBI-ProteinID: XP_026822206
Position
4:28234007..28235955
AA seq 555 aa
MREIIGGFSESGRYYAEIGVNGKVNVWDTSAGDLRHTYSPSGHLNSFVTCITWVQTDNTD
LLCIGTQKGYVEFYNVASGSIQSKVNVQSKAIKSIYCLGQHLYIGSDDGYVVKFDLKTNK
LEAKMKTGKMCAVAMLPDGKMLSASREIKLWNFPSGELVHKFTGHKNEIRSLHIIEADKC
YLLSSARDRFINIWSLSDLKRDPLASLVAEDNISSVYVHNMRNNITVTVTTESGTLHVFE
HVLNGCVAHPLKPHGTLQIAVDNIKDEETIQMPIICSKIYDSVVYVAYGTRPFLAFENIK
LKKLNKCTFIARQDPRKSKSVVGNHIINPNITESKCIELKNSRSSNLPLETRLQNMSEEI
ENTVQTKGESIVHLLIQGLRSNDKNLLESALFVKDERTIDNTVSRLPLQSIIMLVRKLIR
LSQDRTLVSSVSAKWLSAVLRIHSSLLLANPDVLETFLPLENVLSTRLNNFEQLGLLEFK
LKTLVDSLNFDKRDKEKEQEALLVYNDSDDEDKRTTDEEALLTYNESNSEDQSTSDEEEA
MDIDLNGDDHPSILR
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgagggagatcatcggaggtttttcagaatctggaagatattatgctgaaatcggtgtt
aatggtaaggttaacgtttgggatacaagtgctggtgatctacgacatacatattcacca
agtggccatctaaactcttttgtcacctgtattacttgggtccaaacagataatactgac
ttactttgcattggaacacaaaagggttacgtagagttttataatgtggccagtggaagt
atccaatcgaaagtcaatgttcaatcaaaagctatcaagagcatatattgcttgggtcaa
catttatacataggctctgatgatggttatgttgttaagtttgatttgaagaccaataaa
ctagaagcaaaaatgaaaactggtaaaatgtgtgcagtagccatgttgcctgatggaaag
atgttgtcagcgtccagggaaataaaactatggaattttccttcaggtgaattagttcat
aagttcactggacataagaatgagattcgttcattacacattatagaagctgataaatgt
tatttattgagttctgctagagatcgttttattaatatatggtctctcagtgaccttaaa
cgagatccattggcttcattagtggccgaagataatatttcttctgtatacgtacataat
atgcgcaacaacataactgtgacagtaacaacagaaagtggcacattgcatgtgtttgaa
catgtacttaatggttgtgttgcacatccacttaaacctcacggaacccttcaaatagct
gttgacaatattaaagatgaagaaactattcagatgccaattatatgtagtaaaatttat
gattctgtagtgtatgtagcctatggaactaggccctttttggcatttgaaaatattaaa
ttaaaaaaattaaacaaatgtacatttattgcaagacaagacccaagaaaatctaaatca
gttgtaggtaaccatattattaatccaaatattacagagtctaaatgtattgaactaaaa
aatagtagatcatcaaatttaccacttgaaacaagacttcaaaatatgtcagaagaaatt
gaaaatacagttcaaaccaaaggtgaaagtattgttcatttgttaattcaaggtcttcgt
agcaatgataaaaatcttttagagtctgctttatttgttaaagacgaacgcacaattgac
aatactgtttcacgtttaccactacagtccattatcatgcttgtacgtaagctaatacgc
ttatcacaagacagaactctggtaagttctgtaagtgctaaatggttatctgctgtatta
cgtatacactcttctctgttattagcaaatccagatgtcttagaaacatttctaccatta
gaaaatgtattgagtacaagattaaataattttgaacaacttggattattagagtttaaa
ctaaaaactttagtagacagtctgaattttgacaaacgagataaagaaaaagagcaagaa
gctcttttggtatacaatgattctgatgatgaagacaaaagaacaactgatgaagaagct
ttattaacatacaatgaatctaatagtgaagatcaaagtacatcagatgaagaagaagca
atggatatagacttgaatggtgatgatcatcctagtatattaaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system