KEGG   Cupriavidus metallidurans: Rmet_1348
Entry
Rmet_1348         CDS       T00351                                 
Symbol
trbF
Name
(GenBank) conjugal transfer trbF precursor (protein belongs to CMGI-2)
  KO
K20531  type IV secretion system protein TrbF
Organism
rme  Cupriavidus metallidurans
Pathway
rme02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rme00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rmet_1348 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rme02044]
    Rmet_1348 (trbF)
Secretion system [BR:rme02044]
 Type IV secretion system
  Trb secretion system protein
   Rmet_1348 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: ABF08231
UniProt: Q1LNP5
Position
1457397..1458101
AA seq 234 aa
MRFRKPQVRYADTPQPATPYQAAGQVWDDRIGSPRVQAKNWRLMAFGCLTLALLMAGGLV
WRSAQSFVTPYVVEVDNAGQVRAVGEAATPYRPNDAQTAHHIARFVTLVRSLSIDPIVVR
QNWLDAYDYTTDKGAAVLNDYARVNDPFARIGKESVTVQITSVVRASDTSFNVRWTERRY
VNGAAAGLERWTAVVSIVLQPPRTEERLRKNPLGIYVNGLSWSRELDSSEGAKP
NT seq 705 nt   +upstreamnt  +downstreamnt
atgcgattcagaaaaccgcaggtgcgctatgccgacacgccgcagcctgccacgccgtac
caagctgccggccaggtgtgggacgaccgtatcggctcgccgcgcgtgcaggcgaagaac
tggcgcctgatggccttcggctgtctgacgctcgcgctgttgatggccggcggcctggtg
tggcgctcggcgcagtccttcgtgacgccctacgtcgtggaggtggacaacgcgggccag
gtgcgcgccgtgggcgaagccgccacgccgtaccggcccaacgatgcacagacggcgcac
cacatcgcgcgcttcgtgacgctggtgcgctcgctgtccatcgaccccatcgtcgtccgc
cagaactggctggacgcctacgattacacgaccgacaagggcgcggccgtgctcaacgac
tacgcgcgagtcaacgacccgttcgcgcgcatcggcaaggagtcggtgacggtgcagatc
accagcgtcgtgcgcgccagcgacacgtctttcaacgtgcgctggacggaacgccgctac
gtcaacggcgccgcggcgggcctggagcggtggacggccgtggtgtccatcgtgctccag
ccgccgcgcaccgaagaacgcctgcgcaagaaccccctgggcatctacgtcaacggcctg
tcgtggagccgcgaactggattcttccgaaggagccaagccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system