KEGG   Cupriavidus metallidurans: Rmet_6306
Entry
Rmet_6306         CDS       T00351                                 
Symbol
trbJ
Name
(GenBank) conjugal transfer protein (entry exclusion, mating pair formation)
  KO
K20266  type IV secretion system protein TrbJ
Organism
rme  Cupriavidus metallidurans
Pathway
rme02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rme00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rmet_6306 (trbJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rme02044]
    Rmet_6306 (trbJ)
Secretion system [BR:rme02044]
 Type IV secretion system
  Trb secretion system protein
   Rmet_6306 (trbJ)
SSDB
Motif
Pfam: DUF2458 DUF1129 TsaD
Other DBs
NCBI-ProteinID: ABF13165
UniProt: Q5NV46
Position
pMOL28:161972..162730
AA seq 252 aa
MKKWIANLAVAASVLGAAPAHAALPVTDWVGLVQTTISALQSIKSEVYENTNIVYQYQMM
ANQLLQATGLDAEAITEQFNSIKDEIGKYEVYGTTLKDLYGTVSDNADYLKKIQSMVVSS
GKTKEQWFEDQRSLLTNGDKTAKALFSLGEQIFKNTQSVAKRRQKIQSQIKLSATAQAAA
QTTNQMLDVLASQNSDLLQLMSVRAQADADRDQQTVAKETQSAEAMRSLAAAQDEELKNL
RARVFSRKLQSN
NT seq 759 nt   +upstreamnt  +downstreamnt
gtgaagaagtggatcgccaaccttgccgtcgccgcgtccgtgctcggcgccgcccccgct
cacgccgccctacccgtcaccgactgggtgggtctggtgcaaaccacgatctcggcgttg
cagtccatcaagtccgaggtgtacgagaacaccaacatcgtctaccagtaccagatgatg
gcgaatcagttgctgcaagctacaggtctggatgcagaggccatcaccgagcagttcaac
agcatcaaagacgagatcggaaagtacgaggtgtacggcaccacgctcaaggacctctat
ggcaccgtctccgacaacgccgactatctgaagaagattcagagcatggtcgtctcgtcc
ggcaagacgaaggaacagtggttcgaagatcagcgctccctcctgaccaacggcgacaaa
actgccaaggcgctcttcagcctgggcgagcagatcttcaagaacacacaatcggtcgcc
aagcgccgccagaagatccagtcgcaaatcaagctttcggcaaccgcgcaagctgccgcg
caaaccacgaaccagatgctcgacgtattggcgagccagaactccgatttgctacagctc
atgagtgtgcgtgcccaggccgacgccgatcgggaccaacagaccgttgccaaggagacc
cagagcgcagaagcgatgcgatcactggcagccgctcaagatgaagagctcaagaacctc
cgggcccgcgtcttctcccgcaagctgcagtccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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