KEGG T01606: Rhom172

Rhodothermus marinus SG0.5JP17-172: Rhom172_0613

Entry

Rhom172_0613      CDS       T01606

Name

(GenBank) phenylalanyl-tRNA synthetase, beta subunit

K01890

phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]

Organism

rmg Rhodothermus marinus SG0.5JP17-172

Pathway

rmg00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:rmg00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Rhom172_0613
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rmg01007]
    Rhom172_0613
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rmg03016]
    Rhom172_0613
Enzymes [BR:rmg01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     Rhom172_0613
Amino acid related enzymes [BR:rmg01007]
Aminoacyl-tRNA synthetase
  Class II (U)
   Rhom172_0613
Transfer RNA biogenesis [BR:rmg03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Rhom172_0613
Prokaryotic type
    Rhom172_0613

SSDB

Motif

Pfam:

B3_4 tRNA_synthFbeta FDX-ACB B5 tRNA_bind

Other DBs

NCBI-ProteinID:

AEN72552

Position

complement(693725..696202)

AA seq 825 aa
MKLSYRWLQQYIDLDLSPSELAEALIGLGLEVEEVEPLGTDLKGVVIGRVLEVRPHPNAD
RLTLCRVDLGSGEPVPIVCGAPNVAAGQKVAVATPGTTLLLTDREGNRQPVTIRKTKIRG
EVSEGMICAEDELGLSDDHSGILVLPGDAPVGHPFVEYLQQQGLTVPDYRLEVSLTPNRA
DAASHIGMARDLSALLDRPLRRPEVAVPEPGGEAARQVQVTIDAPEACPRYVALLVRNVR
IGPSPLWLRQRLAAIGLRSINNVVDVTNYVLHECGQPLHAFDFDQLIGGRIHVRLARAGE
QFTTLDGKTRQLPEGALLICDAERPVALAGIMGGENSEVTDTTTNILIESAYFDPSTIRR
TSKALGLQTDSSYRFERGVDAGLQRWAAARAAQLIVEVAGGEIVPGVVDVQVRSFEPRTV
TLRLPRLAHVLGTEIPSGEVRRILDRLGFAPKPEGEAFRCTVPLYRPDVHEEIDLIEEVA
RVHGYDRLPMPEAFTVPARVPDEPPAQALRRRVRTLLAGFGLREIYTNSLLPREVVRRFV
PASGSDHQTDAPHLVETLNPISAEMAVLRPSLLPGLVQTIVYNQNRGQQVLRFFEFGRVF
ARTDRPDTPVPGFAEHEALVIGLSGPHAPEGWDVQPRLTDFFDLKGLIETLLDTLHLSDR
MALVPAESPEPTVAYQMNLVADGRVLGTLARLSDALQEAYELRAPLYYAELNWDAFAEIA
HPAQQRRYRPFSRFPEVDRDLAVLVDRDQPVGPLLETIREAGGELLRHVGVFDLYEGERI
PSGKKSVAFSLRFGADRTLTDEEVDARLEAIVRELERRFGAQLRR

NT seq 2478 nt +upstreamnt +downstreamnt
atgaaactctcctaccgctggctgcagcaatacatcgacctggacctgtccccttcggag
ctggctgaggccctgatcggcctgggtctggaagtcgaagaagtcgagccgctgggcacc
gaccttaagggcgtggtgatcggccgcgtgctggaggtgcgcccccaccccaacgccgac
cgcctgacgctctgccgcgtcgatctgggaagcggcgagccggtcccgatcgtctgcggg
gcgcccaacgtggcggccggccagaaggtggccgtcgccacccccggcaccacgctgctg
ctgaccgaccgcgagggtaaccgccagcccgttacgatccgcaagacgaagatccggggc
gaagtgtccgagggcatgatctgcgccgaggacgaactcgggctctcggacgaccacagc
ggcatcctggtgctgcccggcgacgctcccgtcggccaccccttcgtcgaatacctgcag
cagcagggcctgacggtgccggactaccggctcgaagtcagcctgacgcccaaccgggcc
gacgcggccagccatatcggcatggcccgagatctctcggcgctgctcgaccggccgctg
cgtcgtcccgaagtggccgtacccgaacccggcggcgaggctgcccgccaggtgcaggtg
accatcgacgcgccggaagcctgtccgcgctacgtggcgctgctggtgcgcaacgtgcgc
atcggtccctcgccgctctggctgcgccagcgcctggccgccatcggcctgcgctcgatc
aacaacgtggtggacgtgaccaactatgtgctgcacgagtgcggccagccgctgcacgcc
ttcgacttcgaccagctgatcggcggacgcatccacgtgcggctggcccgcgcgggcgag
cagttcaccacgctcgacggcaaaacccgccagcttccggaaggcgccctgctgatctgc
gacgccgagcgaccggtggcgctggccggcatcatgggcggcgagaactccgaagtcacc
gacaccacgacgaacattctcatcgaaagcgcctacttcgatccgtccaccatccgacgc
acctcgaaggcactgggtctgcagacggactcgtcctatcgcttcgagcgcggggtcgac
gccggcctgcagcgctgggcggccgcccgcgcggctcagctcatcgtggaggtggccggt
ggcgagatcgtgcccggtgtcgtggacgtgcaggtgcggtcgttcgagccacgcaccgtg
acgctacgcctgccgcgcctggcccacgtactgggcaccgagattccgtccggcgaggtg
cggcgcattctggatcgtctgggctttgcgccgaagccggaaggtgaggccttccgctgc
acggtgccgctctaccgtccggacgtgcacgaggaaatcgatctgatcgaagaagtcgcc
cgcgtgcacggctacgaccggctccccatgcccgaagcgttcaccgtgccagcgcgcgtg
cccgacgagccgccggcccaggcgctgcgtcgccgcgtgcgcaccctgctggccggcttc
ggcctgcgggaaatctacacgaacagcctgctaccacgcgaggtggtgcgccgcttcgtg
cccgcctcgggttccgaccaccagaccgacgcgccgcatctggtcgaaacgctcaacccc
atctcagccgagatggccgtgctgcgaccgtcgctcctgcccggtctggtgcagaccatc
gtctacaaccagaaccggggccagcaggtgctgcgcttcttcgagttcggtcgcgtcttt
gcccgtacggaccgccccgacacgcccgtgcccggctttgccgagcacgaagcgctcgtc
atcggactgagcggcccgcacgctcccgaaggctgggacgtgcagccgcgcctgacggac
ttcttcgatctcaaggggctgatcgaaacgctgctggacacgctgcacctgagcgatcgc
atggcgctggttccggccgaatcgcccgagccgacggtcgcctatcagatgaacctggtg
gccgacgggcgcgtgctgggcacgctggcccgcctgtcggacgcgctccaggaggcctac
gaattgcgcgccccgctctactacgccgagctgaactgggatgcctttgccgagatcgcc
cacccggctcagcagcgccgctaccggcccttcagccgcttccccgaagtggaccgtgac
ctggccgtactcgtcgatcgcgaccagccggtcggtcccctgctcgaaaccatccgggag
gccggcggcgaactgctccgccacgtgggcgtcttcgacctgtacgaaggcgaacgcatc
ccgtccggcaaaaagagcgtggccttctcgctgcgcttcggcgccgatcggacgctgacc
gacgaagaggtggatgcccgcctcgaagcgatcgtccgagaactcgagcgccgcttcggt
gcacaactgcgccgttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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