KEGG   Rickettsia massiliae AZT80: RMB_03550
Entry
RMB_03550         CDS       T01758                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rmi  Rickettsia massiliae AZT80
Brite
KEGG Orthology (KO) [BR:rmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmi03032]
    RMB_03550 (gyrB)
   03400 DNA repair and recombination proteins [BR:rmi03400]
    RMB_03550 (gyrB)
Enzymes [BR:rmi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RMB_03550 (gyrB)
DNA replication proteins [BR:rmi03032]
 Prokaryotic type
  DNA Topoisomerases
   RMB_03550 (gyrB)
DNA repair and recombination proteins [BR:rmi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RMB_03550 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3
Other DBs
NCBI-ProteinID: AFB31534
UniProt: H6QIN4
Position
623536..625959
AA seq 807 aa
MSEIEEKFNESSYGADSIKVLKGLEAVRKRPGMYIGDVGDGSGLHHMIYEVVDNAIDESL
AGYCNLVRVTLNKNGSVTVSDNGRGIPVEIHEEEGISAAEVIMTQLHAGGKFDQNAYKVA
GGLHGVGVSVVNALSEWLELRIWRNNKEYLIRFNNGITEAPLAVVKENIDKKGTEVTFFP
SVETFTNIEFDFGTIEHRLRELAFLNSGVKILLVDNRFEEVKKVEFYYTGGIEAYVKYID
RAKHAIHPCIVVNTENVESGMSFEFAMHWNDSYHENILCFTNNIRQRDGGTHLSAFKSAI
TRVITSYLDTTGLNKKAKNDFSGEDTREGLCCVLSVKVPDPKFSSQTKDKLVSSEVRPVV
ENAVYTKVLEWFEEHPAEAKAIIAKIMEAANAREAARKARELTRRKSALEVSNLPGKLAD
CHAKDPAISELFIVEGDSAGGTAKQGRDSKIQAILPLRGKILNVERARFDKMLGSDQIGT
LITALGISVEREFSLEKLRYHKVIIMTDADVDGSHIRTLLLTFFYRHMPELINKGYLYIA
QPPLYKVKKGAAELYLKNEQALQDYLIKSTINDTTLILDCKEQLVGDNLEELINKVVKFN
GLLDHASKKFNRSITEILAINDLLNNKIFEPESDLRLKKALDVLNSLEDSPDKTNWEVLK
HENKIEFFRFSRGLKESKILLKEQLESFEFVQISKLALTIFDIFSKQLKLIVKSQEFDIL
TPSQLLNTIVECGKRGINIQRFKGLGEMNSDQLWETTLDPTKRTLLQVRVAEIDEAEGIF
STLMGDVVEPRRLFIQANALNVVNLDV
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgtcggaaattgaagaaaaatttaacgaatcatcatacggtgctgattccataaaggtt
ttaaaaggtcttgaagccgtaagaaaaagaccgggaatgtatatcggggatgttggagac
gggtcgggtctacatcatatgatttatgaagtagtcgacaacgctatcgacgagtcgctt
gccggttattgcaatctagtacgagtaacattaaataaaaacggttcagtaaccgtatcc
gataacgggcgaggtatacccgttgaaattcatgaagaagaaggaatatcggcagctgaa
gttattatgacgcaacttcacgccggcggtaagtttgaccagaacgcttataaggttgca
ggcggtctacacggtgtcggtgtatcggttgtaaatgctctttctgaatggcttgagctg
cgtatttggcgtaataataaggaatatttgattagatttaataacggtataacggaagct
ccgcttgcggttgtcaaagaaaatattgataaaaaaggtacggaagttacttttttcccg
tctgtagaaacgtttactaatatagaatttgatttcggcactatagagcatcgtcttcgt
gagcttgcttttttaaattcaggcgtaaagattttactcgtcgataatcgctttgaagaa
gttaaaaaagtagagttttattatacgggcggtatagaagcttatgtaaaatatatagac
agagcgaagcacgctatccatccatgtatagtagttaatacggagaatgttgagtccggt
atgagctttgagtttgcgatgcattggaacgattcttatcatgaaaatattttatgcttt
actaataatattaggcagcgtgatggcggaactcatcttagtgctttcaaatcagcgata
acacgtgttattacctcgtatcttgatactacgggtcttaataaaaaagctaaaaatgac
tttagcggtgaagatactagggaagggctatgttgtgtgctttccgttaaagttcctgat
cctaaattttcttctcaaacaaaagataagctagtaagctccgaagtacgaccggttgtt
gagaatgccgtttatacaaaggttcttgagtggtttgaagagcatccagcagaagctaag
gcaattatagctaagattatggaagctgcgaatgctcgtgaagctgctagaaaagcaagg
gaacttactcgaagaaaatcagctttagaagtctcgaatttaccaggtaaacttgcagat
tgccatgcaaaagatcctgctatttcagaattgtttattgttgagggggactctgcgggc
ggtactgcaaagcagggtagggatagcaaaattcaggctatattgcctttgcgtggtaaa
attttgaacgttgaacgtgcaagatttgataaaatgctcggttcggaccaaatcggtacg
ttaattacagctcttggaattagtgttgaacgagaattttccttagaaaagcttagatac
cataaagttattattatgaccgatgctgatgttgacggctcgcacattagaactttatta
ctcacgtttttctatcgtcatatgcctgagctaataaataaaggctatctatatatagct
cagccaccgctttataaagtaaagaaaggagcagccgagctttatttaaagaatgagcaa
gcgctgcaagattatttgatcaaatcaactattaatgatacaaccttaattctagattgt
aaagagcagttagtgggtgataatttagaagagctaattaataaagtagttaagtttaac
ggcttgcttgaccatgctagcaaaaaatttaatcgctcaattaccgaaattcttgcgatt
aatgacttacttaataacaaaatatttgagcctgaaagtgatttaagacttaaaaaagct
ttagatgttttaaatagcttagaagattcgcctgataagactaattgggaagttttaaaa
catgaaaataaaatagagttcttccgctttagtaggggtttaaaagaaagtaaaatatta
ttgaaagagcagttagaatcatttgagtttgtacaaatatcaaagcttgctttaacgatt
tttgatatatttagtaagcaattaaagcttatagtgaaaagtcaggaattcgatatttta
acaccgagtcagttgttaaataccattgtagaatgcggaaaaagaggtataaatattcag
cgttttaagggtcttggtgagatgaattccgaccagctatgggaaactactcttgatcct
acaaaaagaactttgcttcaggtaagagttgcagaaattgatgaagcagaaggcattttc
tctactttaatgggtgacgttgttgaacctcgcaggttatttatccaagcaaatgcgttg
aatgtcgtgaatttggatgtgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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