KEGG   Rickettsia massiliae AZT80: RMB_05500
Entry
RMB_05500         CDS       T01758                                 
Symbol
lysK
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
rmi  Rickettsia massiliae AZT80
Pathway
rmi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rmi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RMB_05500 (lysK)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rmi01007]
    RMB_05500 (lysK)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rmi03016]
    RMB_05500 (lysK)
Enzymes [BR:rmi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     RMB_05500 (lysK)
Amino acid related enzymes [BR:rmi01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   RMB_05500 (lysK)
Transfer RNA biogenesis [BR:rmi03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    RMB_05500 (lysK)
SSDB
Motif
Pfam: tRNA-synt_1f tRNA-synt_1b tRNA-synt_1g tRNA-synt_1 tRNA-synt_1c tRNA-synt_1e Caskin-tail
Other DBs
NCBI-ProteinID: AFB31857
UniProt: H6QJK7
Position
complement(956752..958320)
AA seq 522 aa
MSEIWEDAIKSNSWPFVEAKKILDSLNGKIPEKGYVLFETGYGPSGLPHIGTFGENARMV
MVQKAFEQLSDIPTKLICFSDDMDGLRKVPSNIPNPEMVAQYMDMPLTSIPDTFGECESY
GHYMNAKLRSFLDKFGFEYEFYSSTNCYKAGMFDEMLIMVLEKYDEIMELMLPTFREERK
ATYSPCMPICPKTGKVLQVPIEKWDAKAGTVTYKDEAGNYIEVPVTGGHCKLQWKPDFGM
RWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSKGNSIS
VDDWLKYAPVESMALFMYQNPTRAKRLFFDVIPKNVDKYITFNQKYHLEEDRAKRFANPV
YHIHHGNVPQIETFGITYSLLLNLTSVCNPSDKSVLWGFISKYEPKATPNTSPYLDHLAE
FAIRYYNDFIKAHKSYLSPSEKHKVILQDILDMLSDIADQTEAEAIQKAIYDIGMKAGYE
NLRDYFKDLYQILLGQNEGPRLGTFIKLYGVQEMKKLVEGQL
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgtcagaaatttgggaagatgctattaagtcaaactcgtggccttttgttgaggctaag
aagatattagacagcttaaacggtaaaattcctgagaaggggtatgtattatttgaaacg
ggttacggtccttcaggtttacctcatatcggtacttttggtgaaaatgcccgtatggtg
atggtacagaaagcatttgagcaattatccgatattccgactaaactcatttgcttttcc
gatgatatggacgggcttcgtaaagtacctagcaacatcccaaatcctgaaatggtggca
cagtatatggatatgccgcttacttctatccctgatacattcggtgaatgtgaaagttat
gggcattatatgaatgcaaagcttcgctcattccttgataaattcggctttgaatatgaa
ttttatagcagtactaactgttataaagctggtatgtttgatgagatgctgataatggtg
cttgagaaatatgacgagataatggagctaatgctaccgacttttagagaagagcgcaag
gctacctattcaccttgcatgcctatatgtccgaaaacaggtaaggtattgcaagtacct
atagagaaatgggatgctaaagcaggcactgtaacgtataaagacgaagctggtaattat
atagaagtaccggtaacgggagggcattgcaaattacaatggaagccggattttggtatg
cgttgggctgcgcttaaagtcgattatgagatgtacggcaaagaccatttggcaaatgct
cgtctttattcggaaatttgccgaatcctaggaggaaagccgcctgtgcagttatgttat
gagttattcttagatgaaaacggtgagaaaatatcaaaatcaaaaggtaatagtattagc
gttgatgattggcttaaatatgctcctgttgaaagtatggcattatttatgtatcaaaat
ccgactagagctaagcgtttgttttttgatgtaattcctaaaaatgttgataaatatatt
acttttaaccagaaatatcatttagaagaggatagggcaaagcgttttgcaaatcccgtt
tatcacatccatcacggaaatgtaccgcaaattgagacttttggaattacctattcattg
cttttaaatcttacttctgtgtgtaatccttcggataaatcggtgctttggggatttatt
agcaaatatgagccaaaagcaactccaaatactagtccttatcttgaccatttagcagaa
tttgctataagatattataatgactttattaaagcacataaatcatatttatctccttct
gaaaagcataaggttattttgcaggatatattagatatgttatctgatatagctgatcaa
accgaagctgaagcaattcagaaagcaatatatgatataggaatgaaagcaggatatgaa
aatctgcgtgattacttcaaagatttatatcaaatattgcttggacagaatgaaggtcca
agacttgggacttttataaagctttacggggtgcaggaaatgaaaaagctggttgaaggg
cagttgtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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