KEGG   Roseovarius mucosus: ROSMUCSMR3_02173
Entry
ROSMUCSMR3_02173  CDS       T04779                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rmm  Roseovarius mucosus
Pathway
rmm03030  DNA replication
rmm03410  Base excision repair
rmm03420  Nucleotide excision repair
rmm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rmm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ROSMUCSMR3_02173 (polA)
   03410 Base excision repair
    ROSMUCSMR3_02173 (polA)
   03420 Nucleotide excision repair
    ROSMUCSMR3_02173 (polA)
   03440 Homologous recombination
    ROSMUCSMR3_02173 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmm03032]
    ROSMUCSMR3_02173 (polA)
   03400 DNA repair and recombination proteins [BR:rmm03400]
    ROSMUCSMR3_02173 (polA)
Enzymes [BR:rmm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ROSMUCSMR3_02173 (polA)
DNA replication proteins [BR:rmm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ROSMUCSMR3_02173 (polA)
DNA repair and recombination proteins [BR:rmm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ROSMUCSMR3_02173 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ROSMUCSMR3_02173 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: ARE83645
UniProt: A0A1V0RPT3
Position
complement(2240684..2243488)
AA seq 934 aa
MSFGKGCHLHLIDGSSFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQRYVEGNNGHDAP
THVAVIFDKGSHTFRNDLYPEYKANREAMPEDLRPQIPLTREATRAFNIACEEKEGYEAD
DIIATLACQARDLGGRVTIISSDKDLMQLVGDGVEMLDAMKNRLIDVEGVREKFGVSPDR
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGSLEALLDRAEEIKQPKRRDTLIEKRA
QIEMSKRLVQLDCNTPLDFTLDDLEVRDPDPEMLLGFLAQMEFRTLSKRIAEALGAVAPT
IPEPAAQSAATAPDQSPDWPAIEPETYVHVSDRATLDAWIATIRAQGYVAFDTETTSLNE
MQADLVGISLATAPGRACYIPVAHKDGAADDLFGSDARAEGQLPLDEVLDALKPVLEDDA
ILKIGQNMKYDAKILAAHGITVAPIDDTMLMSYALHAGLHGHGMDTLSERYLNHSPIPIK
SLLGSGKAAVTFDRVPVAEAVKYAAEDADITLRLWLTLKPQLHRAQVTTVYETLERPLVP
VLARMERDGVLVDRDTLRAMSGKFAQKMAGLESEIHALAGRSFNVGSPKQLGEILFDEMG
LPGGEKGKTGAYATGADVLEDLATEHDLPARVLDWRQLSKLKSTYTDALQDHIDPDTGRV
HTSYLQTGASTGRFSSSDPNLQNIPVRSEEGRRIREAFVAAPGNRLVSLDYSQIELRILA
HVAGIETLKQAFRDGHDIHAMTASEMFNVPLAEMTPEIRRQAKAINFGVIYGISGFGLAR
NLRIPRGEAQGFIDRYFERFPGIKDYMDATTAFAKEHGYVQTLFGRKIHTPEIAAKGPRA
GFARRAAINAPIQGTAADIIRRAMIRMPEAIAGLPCKMLLQVHDELIFEVAEDSVDRLID
VARAVMQGAADPAVRLDVPLVVDAGQGRNWAEAH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgtcattcggaaaaggctgtcacttgcatctgatcgacggatcgtcgttcattttccgc
gcctatcacgcgctgccgccgctgacgcgtaaatccgacgggctgcccattggggctgtg
tcggggttttgcaacatgctgcaacgctatgttgagggcaacaacggccacgacgcgccc
acgcatgtcgccgtcatctttgacaagggcagccatacgtttcgcaacgatctttatccc
gaatacaaggccaaccgcgaagcgatgccagaggacctgcgcccgcagatcccgctgacg
cgcgaggccacgcgcgccttcaacatcgcctgcgaagagaaagagggctacgaggccgac
gacattatcgccacgctcgcctgtcaggcgcgcgatctgggcggacgggtgacgatcatc
agctccgacaaggacctgatgcagcttgtcggcgatggggtcgaaatgctggatgcgatg
aaaaaccgcctgattgatgtggagggcgtgcgcgagaaattcggcgtcagcccggaccgg
gtggtcgatgtgcaggcgctggccggcgatagtgtcgataacgtgcccggtgcgccgggg
atcgggatcaagacggcggcgcttttgatcaacgaattcggctcactcgaggcgcttttg
gaccgcgccgaagagatcaagcagcccaagcgccgcgatacgttgattgaaaagcgcgca
cagatcgagatgtcgaagcggctggtgcaactggattgcaacacgccgctcgactttacg
ctcgacgatctggaagtgcgcgatcctgatcccgagatgttgttggggtttctggcgcag
atggagtttcgcaccctctcgaagcgcatcgccgaggccttgggcgcagtggcgccgacc
attccggaacctgccgcgcaaagcgctgccacggcacccgatcaatcccccgattggcca
gcgatagagcctgagacctatgtccatgtctcggaccgcgcgacgctggacgcgtggatc
gccaccatccgcgcccaaggctatgtcgcctttgataccgagaccacctcgcttaacgaa
atgcaggccgatctggtgggcatttcgctggctacggcaccgggccgcgcctgttacatc
ccggtggcgcacaaggacggggcggcggatgatctctttgggtcggacgcgcgggccgag
gggcaattgccgctggacgaggtgttggacgccctcaaacccgtgcttgaggatgacgcc
atcctcaagatcggtcagaatatgaagtacgacgccaagattctggccgcccatggcata
accgtggcccccatcgacgatacgatgctgatgtcctatgcgctgcatgccgggctgcac
gggcatgggatggacacgctgtcagagcgctatctgaaccatagcccgatcccgataaaa
tccctgctgggtagtggcaaagccgctgtcacctttgaccgcgtgccagtggccgaggcg
gtgaaatatgccgcagaggatgccgacatcacgctgcgcctctggctcacgctcaagccg
cagctgcaccgtgcccaggtcaccacggtctacgagacgctggaacgcccgttggtgcct
gtgctggcgcgcatggagcgggatggcgtgctggtcgaccgtgacacgctgcgcgccatg
tctggcaaattcgcccagaaaatggccggcttggaatcagaaattcacgcgcttgccggg
cgcagtttcaatgtcggttcgcccaagcaattgggagagatcctgtttgacgaaatgggc
ctgccgggcggcgaaaagggcaaaaccggtgcctatgccaccggggccgacgtgctcgag
gatctggcgacagagcatgatctgcctgcgcgcgttctggattggcggcaattgagcaag
ctcaaatccacctatactgacgcgcttcaggatcacatcgatccggatacggggcgggtc
cacacctcctatctgcaaaccggggccagcacggggcggttttcctcgtctgaccccaat
ttgcaaaacattcccgtgcgtagcgaagaagggcgacgcatccgagaggcctttgttgcg
gcccccggcaatcgtctggtcagtctcgattacagccagatcgagttgcgcattttggcg
catgtggccgggatagagacgctcaagcaggcgtttcgcgatggccatgacattcacgcc
atgaccgcgtcagagatgttcaacgtcccgctggcagagatgacgcccgagatcaggcgt
caggccaaggcgatcaatttcggcgtgatctatggcatctcgggctttggtcttgcacgc
aatctgcgcattccaagaggcgaggcgcaggggttcatcgaccgctatttcgagcggttt
ccgggcatcaaggattacatggacgccaccaccgcctttgccaaggaacatggctatgtc
cagaccctgttcgggcgcaagatccacacgcccgagattgccgccaaaggcccgcgcgcc
ggattcgcccggcgtgccgcgatcaacgcgccaattcaaggcacggcggcggacatcatc
cgccgcgcgatgatccgtatgcccgaggcgatcgcggggctgccctgcaagatgctgttg
caggtccatgacgaattgatctttgaagtggccgaggacagcgtagaccgcttgatcgac
gttgcgcgcgctgtgatgcagggggccgcagacccggcagtgcgtctagacgtgcccctg
gtggtggatgcgggccaaggccgcaattgggccgaagcgcattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (46)   

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