KEGG   Roseovarius mucosus: ROSMUCSMR3_03082
Entry
ROSMUCSMR3_03082  CDS       T04779                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rmm  Roseovarius mucosus
Pathway
rmm00300  Lysine biosynthesis
rmm00470  D-Amino acid metabolism
rmm01100  Metabolic pathways
rmm01110  Biosynthesis of secondary metabolites
rmm01120  Microbial metabolism in diverse environments
rmm01230  Biosynthesis of amino acids
Module
rmm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rmm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    ROSMUCSMR3_03082 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    ROSMUCSMR3_03082 (dapF)
Enzymes [BR:rmm01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     ROSMUCSMR3_03082 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ARE84545
UniProt: A0A1V0RSC1
Position
3197997..3198830
AA seq 277 aa
MDQVDHTGLPFFKMHGLGNDFVVLDGRGRDLGLTPALIMAIADRHRGIGFDQLAVISQGM
GDAHLTFYNADGSTSAACGNATRCIARHLMDESGKARLELSTARGALVAVDAGGGLTSVN
MGQPQLDWAEIPLAEAMDTLELPIEGGPVATGMGNPHCTFFVADAEAVPLAQFGPRYEHH
PLYPERTNVQVATVIGPDHIRMRVWERGVGVTLASGSSSCATAVAAARRGLTGRAVRVDL
DGGTIHVDWREDGVWMTGETAHVASGVFTPAFLAAQR
NT seq 834 nt   +upstreamnt  +downstreamnt
atggaccaagttgatcataccgggctgccctttttcaaaatgcatgggctgggaaacgat
tttgtcgtgctggatgggcgtggccgcgatctggggctgacgcctgcgttgatcatggcc
atcgccgaccggcatcggggcattggattcgatcaattggcggtgatctctcaaggcatg
ggcgatgcacatttgaccttttacaacgccgacggttcgacctctgcggcgtgcggcaat
gccacgcgctgtatcgcgcggcacctgatggacgagagcggcaaggcgcggctggagctg
agcacggcgcgcggcgcgctggtggccgtggatgccggtggcgggctgacatcggtgaac
atggggcagccgcagcttgactgggccgaaatcccgctggctgaggcgatggatacgctg
gaattgcccatcgagggcgggccggtggccacgggcatgggcaatccgcattgcacgttt
ttcgtggccgatgccgaggcggtgccgctggcgcaattcgggccgcgctatgagcatcac
ccgctttacccggagcggaccaatgtgcaggtggccacggtgattggccccgatcacatc
cgcatgcgggtctgggagcggggggttggggtgacgctggcctctggctcgtcgtcctgt
gcgacggcggtggcggcggcgcggcggggcctaacggggcgcgcggtgcgggttgatctg
gatggtggcacgatccatgtggattggcgcgaggatggcgtctggatgaccggcgagacc
gcacatgtggcaagcggcgtgttcacgcccgcgtttctggcggcgcagagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (44)   

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