KEGG   Rhodothermus marinus DSM 4252: Rmar_2703
Entry
Rmar_2703         CDS       T01119                                 
Name
(GenBank) UDP-N-acetylmuramoylalanine/D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
rmr  Rhodothermus marinus DSM 4252
Pathway
rmr00470  D-Amino acid metabolism
rmr00550  Peptidoglycan biosynthesis
rmr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rmr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Rmar_2703
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Rmar_2703
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rmr01011]
    Rmar_2703
Enzymes [BR:rmr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     Rmar_2703
Peptidoglycan biosynthesis and degradation proteins [BR:rmr01011]
 Precursor biosynthesis
  Amino acid ligase
   Rmar_2703
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C MurD_N NAD_binding_8 Pyr_redox_2 DAO FAD_binding_3 Pyr_redox 2-Hacid_dh_C NAD_binding_7 Oxidored_nitro Pyr_redox_3
Other DBs
NCBI-ProteinID: ACY49574
UniProt: D0MGL1
Position
complement(3132046..3133413)
AA seq 455 aa
MRPEELRKKRVTVVGGARSGLAVARLLRKAGAEVFLTEQQPAPPGLEATLDALGVRYEFG
GHTPRALEADLMVISPGVPSTAPLVQQARRIGLPVYSEIEVASWFCRAPIVAVTGTNGKT
TTTSLIGYIFRRAGRRTIVAGNIGYPFSDYVLDTTPDDVVVLEVSSFQLDHVATFRPRVS
VLLNITPDHLDRYNYNFNEYAQSKFRIFANQRGEDVLVYNHDDELIRMAAERAHRKRGLR
VLGFSQRTELPAGAFVRDGYLILRIEQQEEVLMHANELALRGRHNLYNSLAAAVAARVME
VRNDVVRESLASFEGVPHRLEFVRELDGVRYVNDSKATNVNAVWYALESFSCPIVLIAGG
RDKGNDYSVLKPLVKEKVRALVAIGESADKLLRELGPLVPHAVKAQSMEEAIQYARVFAE
PGDVVLLSPACASFDMFENYEDRGDTFRRLVMSLQ
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgcgaccggaggagctgcgaaaaaaacgggtaacggtggtgggaggcgcccgaagcggg
ctggccgtagcccggctgctgcggaaggcgggtgccgaagtgtttctgaccgagcagcag
ccggcaccgccggggctggaagcaaccctggacgctctgggcgtgcgctacgagttcggc
gggcacacgccccgggcgctggaggccgacctgatggtgatcagtccgggcgtgccctcg
acggccccgctggtgcagcaggcgcggcggatcggattgcccgtgtactccgaaatcgaa
gtggcctcgtggttctgccgcgcgccgattgtggccgtcacgggcaccaacggcaagacg
accaccaccagcctgatcggctacatcttccgacgggccggacggcgcacgatcgtggcc
ggcaacatcggctatccgttttccgactatgtgctcgacacgacgcccgacgatgtggtg
gtgctggaagtctccagcttccagctcgaccacgtggccactttccggccgcgtgtgagc
gtgctgctgaacatcacgccggaccatctggaccgctacaactacaacttcaatgaatac
gcccagagcaaattccgcattttcgccaaccagcggggcgaggacgtgctggtgtacaac
cacgacgacgaactcatccgcatggcggccgagcgcgcccatcgcaaacgggggttgcgg
gtgctcggcttcagccagcggacggaattgccggccggcgccttcgtgcgtgacggctat
ctgatccttcggatcgaacagcaggaggaagtccttatgcacgcgaatgagctggccctg
cgcgggcgacacaacctgtacaactcgctggcggcggccgttgcggcccgcgtcatggag
gtgcgtaacgacgtggtgcgcgaaagcctggcaagcttcgagggcgtgccgcaccgcctg
gagttcgtgcgcgagcttgacggcgtgcgctacgtcaacgactcgaaggccaccaacgtg
aacgccgtgtggtatgccctggagagcttctcctgcccgatcgtgctgatcgccggcggg
cgggacaagggcaacgactactcggtgctcaagccgctggtgaaagagaaggtgcgggcg
ctggtggccatcggcgaaagcgccgacaagctgctgcgcgagctgggaccgctcgtgccg
cacgccgtcaaggcgcagagcatggaggaggcgatccagtacgcccgcgtgtttgccgag
ccgggcgacgtggtgctgctcagcccggcctgtgcatcgttcgacatgttcgaaaactac
gaggatcgcggcgacaccttccgtcgcctggtgatgagtctgcaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (89)   

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