KEGG   Rothia mucilaginosa: RMDY18_11260
Entry
RMDY18_11260      CDS       T01144                                 
Name
(GenBank) primosomal protein N' - superfamily II helicase
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rmu  Rothia mucilaginosa
Pathway
rmu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RMDY18_11260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rmu03400]
    RMDY18_11260
Enzymes [BR:rmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RMDY18_11260
DNA repair and recombination proteins [BR:rmu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RMDY18_11260
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: BAI64958
UniProt: D2NTI2
Position
complement(1243039..1245447)
AA seq 802 aa
MTQSSSESNSSAPLGAQQESLQQLDLLQGFPALRDALIPAAPEPVNVAAELEASGVPNPV
ARVRVDSTLPQVDRTFDYRVPAELSEDAVPGARVRVLFNGHELTGYIEERAATTDWTRTS
LLPLKSVLSRVPSVAPEIFALAEALADRYASTVANVLRLAVPPRIAALDKKYAPLLPGYE
SDYLGVSSHAGESAPENVEPENVAPEHEASEPADSEPAATSAASSDTDPYAWLATPGAPA
PFVLDPPALNPDAPDAASVFSDYENGAEFIEDVAAGAATRAVMTVLPGHLEHTWADVLAT
ALATAAASGRGAIAVVPTVKNLDLLEAALAERLPADAFVRLSSDSTPHTRYHGFVKARLG
RVPVVIGTRAAAYAPVANLGLVVCWDDGDSSLVEQRAPYCHARDVLLLRASAENTAALFA
GFSMSSEAARLVRTRWASHVRAPRALVRDYSPRIFSTGSEFELARDPLAAMARIPHLAFE
HARRALARGPVLVQVARSGYIPSFSCERCRMPARCGECSGPLSVASGSSVPSCSWCGHLA
QQWRCSECGFTHWRYSAAGATRTAEELGRAFPNVPVISSAGDHVRASVGPEPALVVATPG
AEPVAFGGYAAALLLDADKMLRFDSLRAPEAALRRWLNAAALVRPAALEGTVVTTASPSP
VEQALVRWDPAWFARQELEERAQTGLPPAVRTAAVTGAEADVRAFMEEFLGSSALPERVR
EQLRIVGPVPLDQGYFAWSESLEEDSEEAPVQGDWRTLMFFSYGIAQQVTRELRATRATI
AALKKNVGERPVQIRCDGLDVL
NT seq 2409 nt   +upstreamnt  +downstreamnt
gtgactcagagcagttctgaatcgaactcttcggcaccgttgggtgctcagcaggaatcc
ctgcaacagcttgacctgttgcagggatttcctgctcttcgtgatgccctgattccggct
gccccggagccggtgaacgttgccgccgagttggaggcgagcggcgtgccgaaccctgtg
gcgcgtgtgcgtgtggatagcaccctgccgcaggtggaccgcacgtttgattaccgcgtg
cccgctgagctgagtgaggatgcggtgcccggcgctcgcgtgcgtgtgctgttcaacggt
cacgagctgaccggttacattgaggagcgcgccgccacgactgattggacgcgcacctcg
ctgctgccgctcaagtcggtgctgtcgcgtgtgccctctgttgcgcccgaaatttttgcg
cttgccgaggcgcttgctgaccgttacgcctccacggtggcgaacgtgttgcgcctggcg
gtgccgccgcgtattgccgcgctggataagaagtacgcgccgcttctgccgggttatgag
tcggattatttgggtgtttcttcgcatgcgggtgagtctgctccggagaatgtagaacct
gagaacgtagctcccgagcatgaagcctctgagcccgcggattctgagccggctgccacc
tccgcggcctctagcgataccgacccgtacgcctggcttgccactcccggcgcgcccgcg
cccttcgtgctggatccgccggcgctgaacccggatgcgccggatgccgcctccgtcttt
tccgattacgagaacggtgcggagttcattgaggatgtcgccgccggtgccgcaactcgc
gccgtgatgacggttcttcccggccacctggagcacacgtgggcggatgttttggcgact
gctctcgctacggctgccgcgagtggtcgcggtgctattgcggtggttccgaccgttaag
aacctggatcttctggaggcggcgctcgccgagcgtctgcccgctgacgcgtttgtgcgt
ttgagttctgattcgactccgcatactcgctatcacggttttgtgaaggcgcgtttgggt
cgggttccggtggtgattggtacccgcgcggcggcctacgcgccggtggcgaacctgggc
ctggtggtgtgctgggatgacggcgattcttcgctggtggagcagcgcgccccgtattgt
catgcccgcgatgtgttgcttctgcgtgcttcggctgagaatactgcggcgctgtttgcc
gggttcagtatgagtagtgaggcggcgcgtctggtgcgtacccgctgggcgtctcatgtg
cgtgcgccgcgtgcgctggtgcgcgattattcgccgcgtattttttcgaccgggtcggag
tttgagttggcgcgtgacccgttggcggcgatggcgcgtattccgcacctggcgtttgag
catgctcgtcgggcgttggcgcgtggtcctgtgttggtgcaggtggcgcgtagcggttat
attccgtcgttttcgtgcgagcgttgccggatgccggcgcgttgtggcgagtgcagtggg
cctttgtcggtggcttcgggttcgtcggttccgtcgtgttcgtggtgcggccatttggcg
cagcagtggcgttgttctgagtgcggttttacgcattggcgttattcggcggcgggtgcg
actcgtacggctgaggagctgggtcgtgcgttcccgaatgttccggtgatttcttcggcg
ggtgaccatgtgcgcgcgtcggttggtcctgagcctgcgttggtggtggcgactccgggt
gctgagccggtggcttttggcggctatgcagcggcgcttcttctggatgccgataagatg
cttcgttttgattcgttgcgtgctccggaggcggcgttgcgtcgctggttgaacgcggcg
gcgttggtccgtcctgcggctcttgagggtacggtggtgacgactgcttcgccgtcgccg
gtggagcaggcactggtgcgttgggatcctgcgtggtttgctcgccaggagctggaggag
cgcgctcagacgggtctgcctccggcggttcgtacggctgcggtgaccggtgcggaggcg
gatgttcgcgccttcatggaggagttcttgggttcttctgcgctgccggagcgggtgcgt
gagcagctgcgtattgtggggccggttcctctggatcaggggtattttgcctggtcggag
tctcttgaagaggattctgaggaggcgccggttcagggcgattggcgtaccctgatgttc
ttctcgtacggcattgctcagcaggtgacccgtgagttgcgtgctacgcgtgcaacgatt
gcggcgttgaagaagaacgtgggggagcgcccggttcagattcgctgtgacggcctggat
gtgctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (39)   

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