KEGG   Rattus norvegicus (rat): 100359816
Entry
100359816         CDS       T01003                                 
Symbol
Setd1b
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B isoform X1
  KO
K11422  [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00310  Lysine degradation
rno01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    100359816 (Setd1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    100359816 (Setd1b)
Enzymes [BR:rno01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.354  [histone H3]-lysine4 N-trimethyltransferase
     100359816 (Setd1b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     100359816 (Setd1b)
   HMT complexes
    COMPASS/SET1 complex
     100359816 (Setd1b)
    COMPASS/SET1 complex (yeast)
     100359816 (Setd1b)
SSDB
Motif
Pfam: SET N-SET RRM_1 RRM_5
Other DBs
NCBI-GeneID: 100359816
NCBI-ProteinID: XP_038946057
RGD: 2323325
Ensembl: ENSRNOG00000001337
Position
12:complement(39056809..39082399)
AA seq 1992 aa
MENSHPHHHHQQPPPQPGPSGERRNHHWRSYKLMIDPALKKGHHKLYRYDGQHFSLAMSS
NRPVEIVEDPRVVGIWTKNKELELSVPKFKIDEFYVGPVPPKQVTFAKLNDNIRENFLRD
MCKKYGEVEEVEILYNPKTKKHLGIAKVVFATVRGAKEAVQHLHSTSVMGNIIHVELDTK
GETRMRFYELLVTGRYTPQTLPVGELDAISPIVSETLQLSDALKRLKDGNLSAGCGSGSS
SVTPNSGGTPFSQDTAYSSCRLDTPNSYGQGTPITPRLGTPFSQDSSYSSRQPTPSYLFS
QDPAATFKARRHESKFTDAYNRRHEHHYVHNSAVAAAVAGATAPFRGSSDLSFGTVGGSG
GGTPFKTQSQDSTTYAHTPPPAQTATASGFKSAFSPYQTPAPPFPPPPEEPTATAAFGTR
DSGEFRRAPAPPPLPPSEPPAKEKPGTPPGPPPPDNNSMELGGRPTFGWSPEPCDSPGTP
TLESSPAGPEKPHDSLDSRIEMLLKEQRTKLPFLREQDSDTEIQMEGSPISSSSSQLSPL
THFGTNSQPGFRGPSPPSSRPSSTGLEDISPTPLPDSDEDDDLGLGLGPRPPPEPGPPDP
MGLLGQTAEVNLDLAGDRTPTSERMDEGQQSSGEDMEISDDEMPSAPITSADCPKPMVVT
PGAGAVAAPNVLAPNLPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPPAHPA
VTVPPPPLPAPPGVPPPPILPPLPPFPPGLFPVMQVDMSHVLGGQWGGMPMSFQMQTQML
SRLMTGQGTCPYPPFMAAAAAAASAGLQFVNLPPYRSPFSLSNSGPGRGQHWPPLPKFDP
SVPPPGYIPRQEDPHKATVDGVLLVVLKELKAIMKRDLNRKMVEVVAFRAFDEWWDKKER
MAKASLTPVKSGEHKDEDRPKPKDRIASCLLESWGKGEGLGYEGLGLGIGLRGAIRLPSF
KVKRKEPPDTASSGDQKRLRPSTSVDEEDEESERERDRDMADAPCELAKRDPKSVGVRRR
PGRPLELDSGGEEDEKESLSVSSSSSASSSSGSSTTSPSSSASDKEEEERESTEEEEEEE
EAEEEEEDEERPRSHISSPSSSSSSDKDDDDDDDSDDQIDSDIDDQGTALSVASEKDNVD
SEEEEIERVTTSKAPAVSSSSSSSSSSSESSGSSEFDSSSESSSSSSSSEDEDEMTVPGE
DEEEEEEEEEKETAMATATVVAMAEESMPPVGGQDFEQDRAEVPLGPRGPLRESLCTEEE
VDIEAEDEVPEMQAPVPEESPLPMGAQELSPEPPEEPSPNTQGDMLLSPELPARETEAQP
PSLPEHGPESDLEVEPEPPPMLSLPLQPPLLPPRHPRPPSPPPEPETPEPPKPPVPLEPP
PEDQPPRTPGLCGSLAKSQSTETVPATPGGEPPLSGGSSGLSLSSPQVPGSPFSYPSPSP
GLSSGGLPRTPGRDFTFTPTFPEPSGPLLLPVCPLPTGRRDERAGPLASPVLLETGLPLP
LPLPLPLPLALPVPVLRAQPRPPPQLPPLLPATLAPCPTPIKRKPGRPRRSPPSMLSLDG
PLVRPPPGPALGRDLLLLPGQPQAPIFPSAHDPRAVTLDFRNTGIPAPPPPLPPQPPPPP
PPPPVEPTKLPFKELDNQWPSEAIPPGPRRDEVTEEYMDLAKVRGPWRRPPKKRHEDLVA
QSASPEPSPPQPLFRPRSEFEEMTILYDIWNGGIDEEDIRFLCVTYERLLQQDNGMDWLN
DTLWVYHPSTSLSSAKKKKREDGIREHVTGCARSEGFYTIDKKDKLRYLNSSRASTDEPP
MDTQQGMSIPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFCKS
HIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTIIDA
TKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKIPC
LCGSENCRGTLN
NT seq 5979 nt   +upstreamnt  +downstreamnt
atggagaacagtcacccccaccaccaccaccagcagcccccgccgcagcccggcccttcg
ggcgagaggaggaaccaccattggagaagttacaagttgatgattgacccggctctgaaa
aaggggcaccataaactgtaccgctacgatgggcagcatttcagcctggcgatgtccagc
aaccgcccggtggaaatcgtggaagatccccgggtggtcggcatctggaccaaaaacaag
gagctggagctgtcggtgcccaaattcaagatcgatgagttctacgtgggccctgtgcct
cccaagcaggtgacatttgccaagctgaatgacaacatccgcgaaaacttcctaagggac
atgtgcaaaaagtatggggaagttgaggaggtggagattttgtataacccgaagaccaag
aaacacctgggcatcgccaaggtagtctttgccacggtcaggggcgccaaggaggcagtc
caacacttgcatagcacttctgtcatgggtaacatcatccacgtggagctggacaccaaa
ggggaaactcgcatgcgcttctatgaactgctggtcaccggccggtacacccctcagacc
ctcccagtgggtgagctggatgctatttctccaattgtgagcgagaccctgcagctctcg
gacgctctgaagcggctcaaagatggtaacctgtccgcaggctgtggctctggctcctcc
tcggtcacccccaatagtggcgggacccccttctcccaggatacagcctactccagctgc
cgtctggacacacccaactcctacggacaaggcaccccgatcacgccccgcctgggcacc
cctttctcccaagattccagctattccagtcgtcagcccacaccctcctacctcttcagc
caggaccccgcagcaactttcaaggccaggcggcacgagagcaagttcacagatgcctat
aaccgccgtcatgaacaccattatgtccacaattccgcggtggcagctgcggtggcagga
gccacggctcctttccgaggctcctcagacctctcttttgggacagttggcggcagtggc
ggcggcactcccttcaagactcaatcccaggattccaccacatatgcccatactccacct
cctgcccaaacagccactgcttccggattcaaatcagccttttctccataccagactcca
gcacccccattcccgccaccccccgaggagcccactgccacagcagccttcgggacccgc
gacagtggggagttccggagggcacccgcgcccccacccctgccgccctctgagcctcca
gccaaggagaagccgggcacacctcccggtcccccaccccctgacaacaacagcatggag
ctgggtggtaggcctacctttggctggagtcctgagccctgtgacagccctggcactcct
actctggagtcttctccagcgggaccagagaagccccatgacagcctggactcccgcatt
gagatgctgttgaaggaacaacgcaccaagctgcccttcctgcgggagcaggactcagac
accgagatccagatggaaggcagccccatctcctcctcctcctcccagctctccccactc
acccactttggcactaactcccagcctggcttccgtggcccctcgccaccctcctcacgc
ccctctagcacgggcctagaggacatcagccctacaccactgcctgattccgacgaggat
gatgacctgggcctgggcctcgggcctcggcccccacctgagccaggccccccagaccct
atgggtcttctaggccagacagctgaggtgaatttggacctggcaggagacaggaccccg
acctcagagcggatggatgagggccagcagtcctctggagaggacatggaaatctcagac
gatgagatgccctcagcccccatcaccagcgctgactgccccaagcccatggtggtgacc
ccaggggcaggggctgtggcagcccctaatgtgcttgctccaaacctgcccctgccccca
ccccctggcttccctccgttacccccaccacctcccccacccccaccgcaacctggcttc
cccatgcccccacctttgccgccgccaccaccaccaccaccaccaccagcccatcctgca
gtgacagtccccccgccacccttgccagcgcccccgggtgtcccacccccacccatcctt
ccaccactgccgcccttcccgccaggactgtttcctgtgatgcaggtggacatgagccat
gtgctgggtgggcagtggggcggcatgcccatgtccttccagatgcaaacacagatgtta
agccggctcatgacaggccagggtacttgcccctacccacccttcatggccgctgccgcc
gctgccgcttctgctgggctacagtttgtcaacttgcccccctaccggagcccgttctcc
ctgagcaacagtggcccaggacgtggacagcactggccgcccctgcccaagtttgacccc
tctgtgccaccaccaggctacataccgcgtcaggaggatccgcacaaggccacagtggat
ggggtcctgctagtagtgctcaaggaactgaaggccattatgaagcgggatctcaaccgc
aagatggtggaggtggtggccttccgggcctttgacgaatggtgggacaaaaaggagcgg
atggccaaggcctcactgacccccgtgaagtctggtgagcacaaggatgaggacaggcca
aagcccaaagaccgaatcgcctcctgcctgctggaatcatggggcaagggcgagggcctg
ggttacgagggcctaggcctgggcattggactacggggcgccattcgcctgccctccttc
aaggtcaagaggaaggagccaccggacacagcctcttctggcgaccagaagcggctgcgg
ccttcaacctctgtggatgaggaagatgaagagtcggaacgggagcgtgaccgggacatg
gctgatgccccgtgcgaactcgccaagcgggaccccaaaagtgtgggtgtgcgacgccgg
ccaggacggcccctggagctggacagcggtggggaggaggacgagaaggagtccttgtcc
gtgtcctcatcttcctcagcatcctcatcctctggatcttccacaacctcaccctcatcc
tccgcctcggacaaggaagaggaggaacgagaaagcactgaggaggaggaagaggaagag
gaagcagaggaagaggaggaggatgaagagcgccccaggagccacatatcctccccctca
tcctcatccagctctgataaggatgatgatgatgatgatgacagtgatgaccagattgat
tctgacatcgacgatcagggtacagccctgtcggtggccagtgagaaggacaatgttgat
tctgaggaagaggagatagagagagtcaccacctccaaggccccggctgtgtcatcgtcg
tcatcgtcgtcgtcgtcctccagtgaaagttctggatcttctgaattcgattccagttct
gagtcctcatcctcatcttcatcctcggaggatgaagacgagatgactgtacctggggaa
gacgaggaagaggaggaggaggaggaggagaaagagaccgcaatggctacagcgacggta
gtggcgatggccgaggagagcatgcctccagtgggcggccaggactttgagcaggatagg
gcagaagtgcctctgggcccaagaggccccctgagggagtccttgtgcacagaagaggaa
gtggacattgaggccgaggacgaagtccccgagatgcaggctcctgtgccggaagagtct
ccattgcccatgggtgctcaggaactgagccccgagcccccagaagagccaagcccaaac
acacaaggggacatgttgctctctccagaactccctgccagggagacagaagctcaaccc
ccatcactccctgaacatggtccagagtcagacctggaagtggagcccgagccccctccg
atgctctccttacccttgcagccaccattgctaccccctcgacatccccggccacccagc
ccaccacctgagcccgagaccccagagccccccaaacctcctgtccccctggagcctcct
cccgaagaccagcctccacgtaccccgggcctctgtggcagtctggccaagtcacagagc
acggagacagtgccggccaccccgggcggggagcctccactgtcagggggcagcagtggc
ctgtcactgagctccccgcaggtgcctggcagcccgttctcatacccttccccgtcccct
ggcttgagcagtgggggccttccacggacacctggtcgggacttcaccttcacacctacc
ttccctgagcccagtgggcccttgcttctgcctgtctgccccctccccactggtcgacga
gatgagcgcgctggccccctggcctccccagtgctcctggaaactggcctgcccctcccc
cttcccctgcctctgcccttacctctggcattgcctgtccctgtcctgagggcccagcct
cggccgcctccccagctgcctcccttactgcctgctaccctagctccctgcccaaccccc
atcaagaggaagccaggccggccccggcgatccccaccatctatgctgtccttggatgga
cctttggtccggccaccaccagggcctgcccttgggagggaccttctgctcctgccaggc
caaccacaggcccccattttccccagtgcacatgatccccgggccgtgaccttggacttc
cggaacacggggatcccagcccccccaccgcccctcccaccccagcctcctccacccccg
ccaccaccacctgttgagcccaccaagctgcccttcaaggagctggacaaccagtggccc
tctgaagctattcccccaggacctcgccgagatgaggtcactgaagagtacatggacctg
gccaaggtgcggggaccatggcgacggccacctaagaagcgccacgaagacctggtggcc
caatcagcctcacccgaaccctcaccaccccagcctctcttccggccccgctcagagttt
gaggagatgaccatcctgtatgacatctggaatggtggcattgatgaggaggacatccgc
ttcctatgcgtcacctacgagcgcctgttgcagcaggacaatggcatggactggctgaat
gacacactctgggtctaccatccctccaccagcctttcctcagccaagaaaaagaaacgg
gaggacggtatccgtgagcacgtgacaggctgcgcccgaagcgagggcttctacaccatc
gacaagaaagacaagctgagatacctcaatagcagccgtgccagcacagatgagcccccc
atggatacccagcagggtatgagcatcccagcacagccccatgcctctacccgggcaggc
tcagagcggcggtctgagcagcggcgcctcctgtcctccttcaccggcagctgtgacagt
gacctgctcaagttcaaccagctcaagtttcggaagaaaaagctcaagttctgtaagagc
cacattcacgactggggcctgtttgccatggagcccatcgctgccgatgagatggtcatt
gagtacgtgggtcagaacatccgccaggtgattgcagacatgagggagaaacggtacgag
gacgaaggcatcggtagcagctacatgttcagggtagaccacgacaccatcatcgacgcc
accaagtgcggcaactttgcgcggttcattaatcacagctgcaatcccaactgctatgcc
aaggtgatcacggtggagtcccagaagaaaattgtcatctactccaagcagcacatcaat
gtcaacgaggagatcacatatgactataagttccccattgaggacgtcaagataccctgc
ctctgtggctccgagaactgccgggggaccctcaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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