KEGG   Rattus norvegicus (rat): 100359937
Entry
100359937         CDS       T01003                                 

Definition
(RefSeq) gamma-aminobutyric acid receptor-associated protein-like 2
  KO
K08341  GABA(A) receptor-associated protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04068  FoxO signaling pathway
rno04136  Autophagy - other
rno04137  Mitophagy - animal
rno04140  Autophagy - animal
rno04371  Apelin signaling pathway
rno04621  NOD-like receptor signaling pathway
rno04727  GABAergic synapse
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
rno05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    100359937
   04068 FoxO signaling pathway
    100359937
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100359937
   04136 Autophagy - other
    100359937
   04137 Mitophagy - animal
    100359937
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100359937
  09156 Nervous system
   04727 GABAergic synapse
    100359937
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    100359937
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100359937
   05022 Pathways of neurodegeneration - multiple diseases
    100359937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    100359937
   04121 Ubiquitin system [BR:rno04121]
    100359937
   03029 Mitochondrial biogenesis [BR:rno03029]
    100359937
Membrane trafficking [BR:rno04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    100359937
Ubiquitin system [BR:rno04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   100359937
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100359937
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 100359937
NCBI-ProteinID: XP_002729993
RGD: 2323108
UniProt: P60522
Position
8
AA seq 117 aa
MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQF
MWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaagtggatgtttaaggaggaccactcgctggaacacagatgcgtggaatccgcgaag
atcagagcgaaataccccgaccgggttccggtgatcgttgagaaagtctctggctctcag
attgttgacattgacaagaggaagtacttggtcccatctgacatcactgtggctcagttc
atgtggatcatcaggaaaaggatccagcttccttctgagaaggccatcttcttgtttgtg
gacaagacagtcccacagtccagcctaactatgggacagctttacgagaaggaaaaagat
gaagatggattcttgtatgtggcctacagcggagagaacacttttggcttctga

KEGG   Rattus norvegicus (rat): 58974
Entry
58974             CDS       T01003                                 

Gene name
Gabarap
Definition
(RefSeq) gamma-aminobutyric acid receptor-associated protein
  KO
K08341  GABA(A) receptor-associated protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04068  FoxO signaling pathway
rno04136  Autophagy - other
rno04137  Mitophagy - animal
rno04140  Autophagy - animal
rno04371  Apelin signaling pathway
rno04621  NOD-like receptor signaling pathway
rno04727  GABAergic synapse
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
rno05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    58974 (Gabarap)
   04068 FoxO signaling pathway
    58974 (Gabarap)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    58974 (Gabarap)
   04136 Autophagy - other
    58974 (Gabarap)
   04137 Mitophagy - animal
    58974 (Gabarap)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    58974 (Gabarap)
  09156 Nervous system
   04727 GABAergic synapse
    58974 (Gabarap)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    58974 (Gabarap)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    58974 (Gabarap)
   05022 Pathways of neurodegeneration - multiple diseases
    58974 (Gabarap)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    58974 (Gabarap)
   04121 Ubiquitin system [BR:rno04121]
    58974 (Gabarap)
   03029 Mitochondrial biogenesis [BR:rno03029]
    58974 (Gabarap)
Membrane trafficking [BR:rno04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    58974 (Gabarap)
Ubiquitin system [BR:rno04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   58974 (Gabarap)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    58974 (Gabarap)
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 58974
NCBI-ProteinID: NP_742033
RGD: 61911
Ensembl: ENSRNOG00000017417
UniProt: P60517
Structure
PDB: 
1KJT

Position
10
AA seq 117 aa
MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF
YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaagttcgtgtacaaagaggagcatccgttcgagaagcgccgctctgagggcgagaaa
atccgaaagaaatacccagaccgggtcccggtgatagtggaaaaagctcccaaagctcgg
ataggggacctggacaaaaagaaatacttggtgccttctgatcttacagttggtcaattc
tacttcttgatccggaagcgaattcatctccgtgctgaagatgccttgtttttctttgtc
aacaatgtcattccacccaccagtgccacgatgggtcagctgtaccaggaacaccatgaa
gaagacttctttctatacattgcctacagtgatgaaagcgtctacggtctgtga

KEGG   Rattus norvegicus (rat): 64670
Entry
64670             CDS       T01003                                 

Gene name
Gabarapl2
Definition
(RefSeq) gamma-aminobutyric acid receptor-associated protein-like 2
  KO
K08341  GABA(A) receptor-associated protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04068  FoxO signaling pathway
rno04136  Autophagy - other
rno04137  Mitophagy - animal
rno04140  Autophagy - animal
rno04371  Apelin signaling pathway
rno04621  NOD-like receptor signaling pathway
rno04727  GABAergic synapse
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
rno05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    64670 (Gabarapl2)
   04068 FoxO signaling pathway
    64670 (Gabarapl2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    64670 (Gabarapl2)
   04136 Autophagy - other
    64670 (Gabarapl2)
   04137 Mitophagy - animal
    64670 (Gabarapl2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    64670 (Gabarapl2)
  09156 Nervous system
   04727 GABAergic synapse
    64670 (Gabarapl2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    64670 (Gabarapl2)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    64670 (Gabarapl2)
   05022 Pathways of neurodegeneration - multiple diseases
    64670 (Gabarapl2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    64670 (Gabarapl2)
   04121 Ubiquitin system [BR:rno04121]
    64670 (Gabarapl2)
   03029 Mitochondrial biogenesis [BR:rno03029]
    64670 (Gabarapl2)
Membrane trafficking [BR:rno04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    64670 (Gabarapl2)
Ubiquitin system [BR:rno04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   64670 (Gabarapl2)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    64670 (Gabarapl2)
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 64670
NCBI-ProteinID: NP_073197
RGD: 620510
Ensembl: ENSRNOG00000019425
UniProt: P60522
Position
19
AA seq 117 aa
MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQF
MWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaagtggatgtttaaggaggaccactcgctggaacacagatgcgtggaatccgcgaag
atcagagcgaaataccccgaccgggttccggtgatcgttgagaaagtctctggctctcag
attgttgacattgacaagaggaagtacttggtcccatctgacatcactgtggctcagttc
atgtggatcatcaggaaaaggatccagcttccttctgagaaggccatcttcttgtttgtg
gacaagacagtcccacagtccagcctaactatgggacagctttacgagaaggaaaaagat
gaagatggattcttgtatgtggcctacagcggagagaacacttttggcttctga

KEGG   Rattus norvegicus (rat): 689161
Entry
689161            CDS       T01003                                 

Gene name
Gabarapl1
Definition
(RefSeq) gamma-aminobutyric acid receptor-associated protein-like 1
  KO
K08341  GABA(A) receptor-associated protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04068  FoxO signaling pathway
rno04136  Autophagy - other
rno04137  Mitophagy - animal
rno04140  Autophagy - animal
rno04371  Apelin signaling pathway
rno04621  NOD-like receptor signaling pathway
rno04727  GABAergic synapse
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
rno05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    689161 (Gabarapl1)
   04068 FoxO signaling pathway
    689161 (Gabarapl1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    689161 (Gabarapl1)
   04136 Autophagy - other
    689161 (Gabarapl1)
   04137 Mitophagy - animal
    689161 (Gabarapl1)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    689161 (Gabarapl1)
  09156 Nervous system
   04727 GABAergic synapse
    689161 (Gabarapl1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    689161 (Gabarapl1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    689161 (Gabarapl1)
   05022 Pathways of neurodegeneration - multiple diseases
    689161 (Gabarapl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    689161 (Gabarapl1)
   04121 Ubiquitin system [BR:rno04121]
    689161 (Gabarapl1)
   03029 Mitochondrial biogenesis [BR:rno03029]
    689161 (Gabarapl1)
Membrane trafficking [BR:rno04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    689161 (Gabarapl1)
Ubiquitin system [BR:rno04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   689161 (Gabarapl1)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    689161 (Gabarapl1)
SSDB
Motif
Pfam: ATG8 APG12 VitD-bind_III
Other DBs
NCBI-GeneID: 689161
NCBI-ProteinID: NP_001037759
RGD: 1596143
Ensembl: ENSRNOG00000053362
UniProt: Q0VGK0
Position
4
AA seq 117 aa
MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQF
YFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYGK
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaagttccagtataaagaggaccaccccttcgaatatcggaaaaaggaaggtgaaaaa
ataaggaagaaatacccggacagggtgccggtcatcgtggagaaggctcctaaagccagg
gtccccgatctggataagaggaagtaccttgtgccctccgacctcactgttggccagttc
tacttcttaatccggaagaggatccacctgagacctgaggacgccttattcttctttgtc
aacaacactatccctcccaccagtgctaccatgggacagctgtatgaggacaaccatgag
gaagactattttctgtatgtggcctacagtgatgaaagtgtctacgggaaatga

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