KEGG   Rattus norvegicus (rat): 100361383
Entry
100361383         CDS       T01003                                 
Symbol
Ecm2
Name
(RefSeq) extracellular matrix protein 2 precursor
  KO
K08119  extracellular matrix protein 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    100361383 (Ecm2)
Proteoglycans [BR:rno00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class I
    100361383 (Ecm2)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 VWC LRR_5 LRR_6 LRR_9 Amnionless FYDLN_acid
Other DBs
NCBI-GeneID: 100361383
NCBI-ProteinID: NP_001414036
RGD: 2320282
Ensembl: ENSRNOG00000031716
Position
17:complement(15326359..15358938)
AA seq 606 aa
MKQAVWFCLLLLILLTVFQTDCEPSPRRQRRRMHQRLRKSSSLYPRADRWLEVQQTTAAP
DAGLPTAHSDYSVEENIQSLLGNLGVESSYGVLPGKKGHCSVKGMVMYNKAVWSPEPCTT
CLCSNGRVLCDETTCPPKTCPYTVKPEGECCPICSDTEQQESINQGRRKEEDSEEETERE
GEEEEEEEEEEEEEEEEEDGVRGDVFRMSSRLIPGIPRGRPRLPRSCSLSYRTISCIYGD
FTEIPPITAPEVTTLELVGNSIISIPNEAFNGLPNLERLDLSRNNITSSGIGPKAFKLLK
KLMHLNMDGNNLVHIPSELPSTLEELKINDNNLQAIDEKSLSDLNQLVALELEGNNLSEI
NVNPLAFKSLKNLSYLRLGKNKFRIIPQGLPASIEELYLENNQIEEITEICFNHTRKITM
IVLRYNKIEESRIAPLAWINHENLESIDLSYNKLYHVPSYLPKSLLHLVLIGNQIERIPG
YVFGHMKPGLEYLYLSFNRLSDDGVDLVSFYGAYHSLRELFLDHNDFKSIPPGIQGMKAL
HFLRLNNNKIRNILPEQICNAEEDEDSALEHLHLENNYITTRAMSPYAFSCIRLYSSVVL
KPQRIK
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgaagcaagcggtttggttctgtctccttctgcttattctgcttactgtctttcaaacc
gactgtgaaccaagtcccagaaggcaaaggaggaggatgcaccaaagactcaggaaaagc
tcttcactctaccccagagccgacaggtggcttgaagttcagcaaaccactgctgcacca
gatgctgggctacccactgcccactctgattacagtgtggaggaaaacatacagtcactt
ctaggcaatcttggagtagaatcaagttacggtgtgctaccaggaaagaaaggacactgc
tctgtaaagggcatggtcatgtacaacaaagctgtctggtctcctgagccctgcaccacc
tgcctctgctcaaatggaagagtgctttgtgatgaaactacgtgcccccccaagacatgc
ccctataccgtcaaaccggaaggagagtgctgccccatctgctctgacactgaacaacaa
gaatccattaaccaaggaagaaggaaggaagaggacagtgaggaggagactgagagagaa
ggagaggaagaggaggaagaggaggaggaggaggaggaggaagaggaggaagaagatggt
gtaagaggagatgtgttcagaatgtcttcccggttaatacctggaatcccaagaggcagg
ccacgcctgcccagaagctgttctctgtcctacaggactatcagttgcatttatggagac
ttcactgagatcccacccataacagcaccagaagtaacgaccctggagctggttgggaat
tcaatcatctccattccaaatgaagcatttaatggattaccaaatttggaaagacttgat
ctgagcagaaataatatcacttcttcaggcataggtccaaaagcattcaagcttttgaag
aagttaatgcatctgaacatggacggaaataatttggtacatattccttctgaattacca
tctacactagaagaacttaaaataaacgacaacaatctccaggctatcgatgagaaaagc
ttatcagacttaaatcaacttgtcgctttagaattggagggaaacaatctcagtgaaatc
aatgtcaaccctctagctttcaaatccttgaagaacttatcatacctacgtctgggaaaa
aacaaattcagaatcataccacaaggtcttccagcttctattgaggagttgtacctagaa
aataatcaaattgaagaaataactgaaatttgtttcaatcacaccagaaagataactatg
attgtactacgttataataaaatagaagaaagtcggattgctcctttagcatggataaat
cacgaaaatcttgaatctatcgacctgtcctacaacaagctctaccacgtcccctcctat
ctacccaaatctcttttgcaccttgtcctaattgggaaccaaattgaacggatccctggc
tatgtgtttggccacatgaaaccaggcctggagtacttgtacctgtcatttaacagactt
tctgatgatggtgtggacctagtctcgttctatggagcatatcattctctgagagaacta
tttctggatcacaatgacttcaaatccataccccctggaatacaaggaatgaaagcattg
cattttctgaggctgaacaacaataagatacggaacatccttcctgaacaaatctgcaat
gctgaggaagatgaggactcagctcttgaacaccttcatcttgaaaacaattacatcaca
actagagctatgtcgccctatgcgttttcatgcataagactgtactcaagtgttgttctt
aaaccacaacgcatcaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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