KEGG   Rattus norvegicus (rat): 100361891
Entry
100361891         CDS       T01003                                 

Gene name
Rab5al1
Definition
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04014  Ras signaling pathway
rno04144  Endocytosis
rno04145  Phagosome
rno04962  Vasopressin-regulated water reabsorption
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
rno05146  Amoebiasis
rno05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    100361891 (Rab5al1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100361891 (Rab5al1)
   04145 Phagosome
    100361891 (Rab5al1)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    100361891 (Rab5al1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100361891 (Rab5al1)
   05152 Tuberculosis
    100361891 (Rab5al1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100361891 (Rab5al1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100361891 (Rab5al1)
   05022 Pathways of neurodegeneration - multiple diseases
    100361891 (Rab5al1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    100361891 (Rab5al1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    100361891 (Rab5al1)
   04031 GTP-binding proteins [BR:rno04031]
    100361891 (Rab5al1)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100361891 (Rab5al1)
 Endosome - Lysosome transport
    100361891 (Rab5al1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100361891 (Rab5al1)
  Exosomal proteins of other body fluids (saliva and urine)
   100361891 (Rab5al1)
  Exosomal proteins of colorectal cancer cells
   100361891 (Rab5al1)
  Exosomal proteins of bladder cancer cells
   100361891 (Rab5al1)
GTP-binding proteins [BR:rno04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100361891 (Rab5al1)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA RsgA_GTPase GTP_EFTU AAA_16 MCR_beta BrnT_toxin
Other DBs
NCBI-GeneID: 100361891
NCBI-ProteinID: XP_003751425
RGD: 2319287
UniProt: M0RC99
Position
14
AA seq 215 aa
MANRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQR
QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKK
LPKNEPQNPGANSARGRGVDLTEPAQPARSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctaatcgaggagcaacaagacccaacgggccaaatactggaaataaaatatgccag
ttcaaactggtacttctaggagagtctgctgttggcaaatcaagtctggtgcttcgcttt
gtgaaaggccaatttcatgagtttcaagagagtaccattggggctgcctttctaacccaa
actgtgtgtcttgatgacacaacagtaaaatttgaaatatgggatacagctggccaagaa
cggtatcatagcctagcaccaatgtactaccgaggagcacaagccgccatagttgtgtat
gatattacaaatgaggagtccttttcgagagcaaaaaactgggttaaagaacttcaaagg
caagcgagtcctaatattgtgatagctttgtcaggaaacaaggctgacttagcaaataaa
agagctgttgacttccaggaagcacagtcctatgcagatgacaacagcttattatttatg
gagacatcagctaagacaccaatgaatgtaaatgaaatatttatggcaatagctaaaaag
ctgccaaagaacgaaccacaaaatccaggcgcaaactcagccagaggacgaggagtagac
cttactgagcctgcacagccagccagaagccagtgttgtagtaactga

KEGG   Rattus norvegicus (rat): 287709
Entry
287709            CDS       T01003                                 

Gene name
Rab5c
Definition
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04014  Ras signaling pathway
rno04144  Endocytosis
rno04145  Phagosome
rno04962  Vasopressin-regulated water reabsorption
rno05132  Salmonella infection
rno05146  Amoebiasis
rno05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    287709 (Rab5c)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    287709 (Rab5c)
   04145 Phagosome
    287709 (Rab5c)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    287709 (Rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    287709 (Rab5c)
   05152 Tuberculosis
    287709 (Rab5c)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    287709 (Rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    287709 (Rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    287709 (Rab5c)
   04031 GTP-binding proteins [BR:rno04031]
    287709 (Rab5c)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    287709 (Rab5c)
 Endosome - Lysosome transport
    287709 (Rab5c)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   287709 (Rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   287709 (Rab5c)
  Exosomal proteins of colorectal cancer cells
   287709 (Rab5c)
  Exosomal proteins of bladder cancer cells
   287709 (Rab5c)
GTP-binding proteins [BR:rno04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    287709 (Rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA RsgA_GTPase GTP_EFTU AAA_16
Other DBs
NCBI-GeneID: 287709
NCBI-ProteinID: NP_001099310
RGD: 1307095
Ensembl: ENSRNOG00000018568
UniProt: B0BNK1
Position
10
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAAGAPGRNRGVDLQESNPASRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcgggtcgaggaggtgcagcacgacccaatggaccagctgcaggcaacaagatctgt
cagtttaagctggtcctcttgggcgagtctgcagtgggcaaatccagcctggtcctccgc
tttgtcaaggggcagttccatgagtaccaggagagcacaattggagcggctttcctcaca
cagactgtctgcttagacgacacaacggtcaagtttgagatctgggacacagctgggcaa
gagcgatatcacagcctggccccgatgtactatcggggggcccaagcagccattgtggtc
tatgacatcaccaacacagatacatttgcacgggctaagaactgggtgaaggagttacag
aggcaggccagccccaacatcgtcattgcactagcgggtaacaaagcagacctggccagc
aagagagccgtggagtttcaggaagcacaagcctacgcagatgacaacagtttgctgttc
atggagacgtccgcaaagactgcaatgaacgtgaatgaaattttcatggcgatagctaag
aagcttcccaagaatgagccccagaatgcagctggtgctccaggccgaaacagaggtgtg
gatctgcaggagagcaacccagccagccggagccagtgctgcagcaactga

KEGG   Rattus norvegicus (rat): 288779
Entry
288779            CDS       T01003                                 

Gene name
Rab5b
Definition
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04014  Ras signaling pathway
rno04144  Endocytosis
rno04145  Phagosome
rno04962  Vasopressin-regulated water reabsorption
rno05132  Salmonella infection
rno05146  Amoebiasis
rno05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    288779 (Rab5b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    288779 (Rab5b)
   04145 Phagosome
    288779 (Rab5b)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    288779 (Rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    288779 (Rab5b)
   05152 Tuberculosis
    288779 (Rab5b)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    288779 (Rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    288779 (Rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    288779 (Rab5b)
   04031 GTP-binding proteins [BR:rno04031]
    288779 (Rab5b)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    288779 (Rab5b)
 Endosome - Lysosome transport
    288779 (Rab5b)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   288779 (Rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   288779 (Rab5b)
  Exosomal proteins of colorectal cancer cells
   288779 (Rab5b)
  Exosomal proteins of melanoma cells
   288779 (Rab5b)
GTP-binding proteins [BR:rno04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    288779 (Rab5b)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase Gtr1_RagA GTP_EFTU AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 288779
NCBI-ProteinID: NP_001073405
RGD: 1306489
Ensembl: ENSRNOG00000006130
UniProt: A1L1J8
Position
7
AA seq 215 aa
MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQNPGGAAGRSRGVDLHEQAQQNKSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atgactagcagaagtacagccaggcccaatgggcagccccaggccagcaaaatatgccag
ttcaaattggtcctgctgggagaatctgcagtggggaagtcgagcctggtgttacgtttt
gtcaaaggacagttccatgaataccaggaaagtaccattggagcggccttcctcacccag
tcggtgtgtctagatgacacaacagtcaagtttgagatctgggacacagctgggcaggaa
cgataccacagtttagcccccatgtactacaggggtgcccaggctgccatcgtggtctat
gatatcactaatcaggaaacgtttgcccgggcaaagacatgggtaaaggaactacagcgg
caagccagccctagcatcgtcattgccttggcagggaacaaagctgaccttgccaacaag
cgcatggtggagtatgaagaggctcaggcatatgcagatgacaacagcttattatttatg
gagacttcagctaagactgctatgaacgtgaatgatctcttcctggcaatagcaaagaag
ttgccaaagagtgaaccccagaatccagggggtgcagcaggccgaagtcggggcgtggat
cttcatgagcaggcccagcagaacaagagccagtgttgtagcaactga

KEGG   Rattus norvegicus (rat): 64633
Entry
64633             CDS       T01003                                 

Gene name
Rab5a
Definition
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04014  Ras signaling pathway
rno04144  Endocytosis
rno04145  Phagosome
rno04962  Vasopressin-regulated water reabsorption
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
rno05146  Amoebiasis
rno05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    64633 (Rab5a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    64633 (Rab5a)
   04145 Phagosome
    64633 (Rab5a)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    64633 (Rab5a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    64633 (Rab5a)
   05152 Tuberculosis
    64633 (Rab5a)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    64633 (Rab5a)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    64633 (Rab5a)
   05022 Pathways of neurodegeneration - multiple diseases
    64633 (Rab5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    64633 (Rab5a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    64633 (Rab5a)
   04031 GTP-binding proteins [BR:rno04031]
    64633 (Rab5a)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    64633 (Rab5a)
 Endosome - Lysosome transport
    64633 (Rab5a)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   64633 (Rab5a)
  Exosomal proteins of other body fluids (saliva and urine)
   64633 (Rab5a)
  Exosomal proteins of colorectal cancer cells
   64633 (Rab5a)
  Exosomal proteins of bladder cancer cells
   64633 (Rab5a)
GTP-binding proteins [BR:rno04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    64633 (Rab5a)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA RsgA_GTPase GTP_EFTU AAA_16 MCR_beta BrnT_toxin
Other DBs
NCBI-GeneID: 64633
NCBI-ProteinID: NP_073183
RGD: 620936
UniProt: M0RC99
Position
9
AA seq 215 aa
MANRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQR
QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
LPKNEPQNPGANSARGRGVDLTEPAQPARSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctaatcgaggagcaacaagacccaacgggccaaatactggaaataaaatatgccag
ttcaaactggttcttctaggagagtctgctgttggcaaatcaagtctggtgcttcgcttt
gtgaaaggccaatttcatgagtttcaagagagtaccattggggctgcctttctaacccaa
actgtgtgtcttgatgacacaacagtaaaatttgaaatatgggatacagctggccaagaa
cggtatcatagcctagcaccaatgtactaccgaggagcacaagccgccatagttgtgtat
gatattacaaatgaggagtccttttcgagagcaaaaaactgggttaaagaacttcaaagg
caagcaagtcctaatattgtgatagctttgtcaggaaacaaggctgacttagcaaataaa
agagctgttgacttccaggaagcacagtcctatgcagatgacaacagcttattatttatg
gagacatcagctaagacatcaatgaatgtaaatgaaatatttatggcaatagctaaaaag
ctgccaaagaacgaaccacaaaatccaggcgcaaactcagccagaggaagaggagtagac
cttactgagcctgcacagccagccaggagtcagtgttgtagtaactaa

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