KEGG   Rattus norvegicus (rat): 100362124
Entry
100362124         CDS       T01003                                 
Symbol
Ift140
Name
(RefSeq) intraflagellar transport 140
  KO
K19672  intraflagellar transport protein 140
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    100362124 (Ift140)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   100362124 (Ift140)
SSDB
Motif
Pfam: ANAPC4_WD40 Clathrin Coatomer_WDAD tRNA_int_end_N2 RNase_HII Exo84_C Hira
Other DBs
NCBI-GeneID: 100362124
NCBI-ProteinID: NP_001414055
RGD: 2318759
Ensembl: ENSRNOG00000016545
Position
10:14537134..14624926
AA seq 1463 aa
MALYFDHRIKAPDASSSPSHITWHPTHPFLAVASVSPSSGGNVDIYLEQGEPVPDTHIER
SFQATSLCWHPTRLILAIGWETGEVIMFNKQDKEQHTVPLPHTTDIAILSWSTSGSCLVS
GDKLGVLLLWRLDQRGRVQGTPLLKHEYGKPLTHCIFRLPPPGEDLVQLAKAAVSGDEKA
LDMFNWRKSSFGSFLKTGSQEGLSFFVSLMDGTVHYVDEKGKTAQVASTDSSIQTLFYIE
KREALVVVTQNLLLSLYVVNPEGEAEEVMKVKLSGKTGRRADITLIEGSLLVTAIGEPVL
RFWDLERGENYILSLQEKFGFEKGENINSVCYCKAKGLLAAGTHKGRVAMWKKVPVSPSG
RGAEGKDMWALQTPTELEGNITQIKWGSRKNLLAVSTSDSVSILSEQAMSSHFHQQVAAV
QISPSLVNVSFLSTGSTHSLRTDMHISGVFATKDAVAVWNGKQVAIFEPSGSTLRNAGTF
LCETSVLAMHEESIYTVEPNRLQVRTWQGTVKQLLLFSETEGSPCFLDVCGTFLVAGTDL
AHFKSFDLSRREAKVHCSCKNLAQMIPDVGSITSLRCNANGNKISILLSKVDNSPDSKIY
VYDVEMDTVNVFNFKTGHIGQIQTLPFNEPPTNEAHFFMNESLASYVPVNHFWDQSEPRL
FVCEALQEAPGAQPQAIDKQPHMEEGTCHKEEVLILSFFASEEHGFLLHDSFPRPSTYQS
LLGLEVPHYYFTKKPGEADKEDKMDSGHYHIPQMVAKKPLRDFVGLEDCDKPTRDAMLNF
SFFVTIGDMDEAFKSIKLIKSETVWENMARMCVKTQRLDVAKVCLGNMGHARGARALREA
EREPELEARVAMLAIQLGMLEEAEQLYKKCKRYDLLNKFYQASDQWQKAVEVAELHDRVH
LRTTYYNYAKHLEASADCGLALSYYEKSDTHRFEVPRMLSEDLQSLELYINRMKDKTLWR
WWAQYLESQAEMDTALRYYELAQDYFSLVRIHCFQGNIQKAAEIANETGDWAASYHLARQ
YESQDEVKQAVHFYTRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGE
QMDRAVMLYHKAGHFSKALELAFTTQQFAALQLIAEDLDEKSDPALLARCSDFCIEHRQF
EKAVELLLAAKKYHEALQLCLEQNMTITEEMAEKMTVSKDSKDLSEESRRELLEQIANCC
MRQGNYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDW
RKEPEIMKNIISFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAYKCLSKAKA
KNPLDQETKLAQLQSKMTLVKRFIQARRTYTEDPKESVRQCELLLEEPDLDSTIRVGDIY
GFLVEHHVQMEEYQMAYKYLEEMRKRLPSANMSYYVDQRTVDTVHQGLGLPPSRIMPERV
RHNSMEDHKEVYEEVIEEVDNDP
NT seq 4392 nt   +upstreamnt  +downstreamnt
atggcactgtattttgaccaccgaatcaaagctccagatgcatccagctctccctctcac
atcacctggcaccccacccacccattcctggcagtggcatctgtaagcccatcttctgga
ggcaacgtagacatctaccttgaacaaggtgagcccgtgcctgacacccacattgagagg
tccttccaggccacttcactatgctggcacccaacaaggcttatcctggctattggctgg
gaaactggagaagtaataatgtttaataagcaggacaaggagcagcacacggtgcccctg
ccacatacgactgacattgccatcctcagttggagtaccagcgggagctgcctggtatct
ggagacaagctcggggtcctgctcttgtggagattggaccagcgaggccgagtacagggg
acaccactcctgaaacacgaatacgggaaaccgctcacccattgcatcttccggctcccc
cctcctggggaggatctggttcagttggcaaaggcagcagtaagtggggatgagaaagcc
ctggacatgtttaactggagaaaaagcagctttggaagtttcctgaagacggggtctcaa
gaggggctgtctttctttgtcagtctcatggatgggacagtgcactatgtggatgaaaag
ggcaagactgctcaggtggcatccacggacagctctatccagaccctgttctacattgag
aagagagaggcactggttgtggtcacacagaaccttctcctgtctctgtatgtggtgaat
cctgagggggaagctgaagaagtcatgaaggtaaagttgagtgggaagacaggccgccgg
gcagatatcactctgatagagggcagtcttcttgtgacagctattggggaacctgtgctc
aggttctgggacttagaacggggagagaattacatactgagtctacaggagaagtttggc
tttgaaaagggagagaatataaactctgtgtgttactgtaaagccaaaggtctcctggca
gctggtacccataaaggacgagtagccatgtggaagaaagtgccagtgtccccaagtggc
cgtggggcggagggcaaggatatgtgggcccttcagacacctactgagcttgaaggaaac
atcacacagataaagtggggctccaggaagaacctgctggcggtgagcacctctgactcc
gtgtccatcctcagtgagcaagccatgtcgtcacacttccaccagcaagtggctgccgtg
cagatctccccgagcctagtcaacgtgtctttcctgtccacggggagcacgcacagcctg
cgcaccgacatgcacatcagtggagtgtttgccaccaaggatgctgttgctgtctggaat
ggaaaacaggtggcgatctttgaaccttcagggtccaccttacgcaatgcagggacattc
ctgtgtgaaacatcggtgctagccatgcacgaggaaagcatttacactgtagagccaaac
cgactccaagtccgcacctggcagggcactgtcaaacaacttctgctgttctctgagacc
gaggggagcccctgcttcctagatgtctgtgggactttcctggttgcagggacagattta
gctcactttaaaagttttgatctttccagaagggaagcaaaagtgcactgcagctgcaag
aacctggcccagatgatccccgacgtggggagcatcacttcactgagatgcaatgccaat
gggaacaagatcagtatcctccttagcaaggttgacaacagtcctgattccaaaatctac
gtctatgacgttgaaatggacacagtgaatgtcttcaacttcaagactggacacattgga
cagatacagactctgccctttaatgagcctccgaccaatgaggcccacttctttatgaat
gagagcctagcaagttacgttcctgtgaaccatttctgggatcagagtgaacccaggctc
tttgtgtgcgaggccttgcaggaggcacctggagcccagccacaggctatagacaagcag
ccccacatggaggaaggcacgtgccacaaggaagaagtattaattctctcattcttcgct
tctgaagagcatggcttcctgcttcatgacagcttcccccggccttcaacctaccagagc
cttctgggcctggaagtgcctcactattacttcacaaaaaagcctggagaagcagacaaa
gaagacaagatggattctgggcactaccacatccctcagatggtagccaagaagccccta
cgagactttgtggggctggaggactgtgacaagcctactcgggatgccatgctcaacttc
agcttctttgtcaccattggagacatggatgaagctttcaaatctatcaaactcatcaag
agtgagaccgtctgggagaacatggcacgcatgtgtgtgaagactcagaggctggatgtt
gccaaggtgtgcctagggaacatgggccatgcccggggggcccgagcactgcgggaagct
gagcgggaaccagaactagaagccagagtggccatgttggccatacagctgggcatgctg
gaggaggctgaacaactgtataagaagtgcaaacgctacgacctcctaaacaagttctac
caggcctcagaccagtggcagaaagctgtggaggtagcagagctccatgaccgagtccac
ctgcgcaccacctactacaactatgccaagcacctggaggccagcgccgactgcggcctg
gccctcagctactatgagaagtcagacacacaccgttttgaggtacctaggatgctctca
gaagacctgcagtcactggagctgtacatcaataggatgaaggacaagaccctgtggaga
tggtgggcccagtacctggagagccaggcagagatggacaccgcgttgcgctactacgag
ctggcccaggactacttctccctggtccgtattcactgcttccagggcaacattcagaag
gctgctgaaatagccaacgagactggagactgggctgcatcctaccaccttgcccggcag
tacgagagccaggatgaggtaaaacaggcagtgcacttctacacacgggcacaggctttc
aacaacgccatccgcctgtgcaaggagaatggcttagatgaccaactcatgaacttggcc
ctcttgagctcccccgaggacatgattgaggcagcccggtattacgaggagaagggcgag
cagatggacagggcagtcatgctgtatcacaaggctggacacttctccaaggccctggag
ctggccttcaccacccagcagtttgcagccctacaactcatagcagaggacctggatgag
aagtcagatcctgctctcctggcccgctgctcagacttctgcattgagcacagacagttt
gaaaaggccgtggagcttctgctggctgccaagaagtaccacgaggctctgcagctgtgc
ctagagcagaacatgaccatcactgaggagatggccgagaagatgactgtgtccaaggac
tcgaaggacctgtccgaggagtcacggcgtgagctgctagaacagattgcaaactgctgt
atgcgccagggcaactatcacctggctaccaagaagtacacacaggctgggaacaagctg
aaggccatgagagccctgctcaaatctggagacacagagaaaattgtgttctttgcgggt
gtctcaagacagaaggaaatctacatcatggctgccaattacctacagtccttggactgg
cggaaggagccagagattatgaagaatatcattagcttctacacaaaagggcgggccttg
gacctcctggctggcttctatgatgcctgcgcccaggtggagattgacgaataccagaac
tatgacaaggcccatggagcactgactgaggcctataagtgcctgtccaaagccaaggcc
aagaaccctctggaccaggagaccaagctagcccagctacagagcaagatgacactagtg
aagaggttcatccaggcccgaaggacatacacagaggaccccaaagaatccgtcagacaa
tgcgagctgctcctagaagagccagacctagacagcaccattcgtgtcggggacatctat
ggcttcctggtggagcaccatgtgcagatggaggaataccagatggcctataagtatctt
gaggagatgaggaaaagacttccttctgccaacatgtcatactatgtggaccagcgcact
gtggacactgtgcaccagggtctgggcctccctccatctcgcatcatgcctgagcgggtc
cgccacaacagcatggaggaccacaaggaggtgtacgaggaggtgatagaagaggtggac
aatgacccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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