KEGG   Rattus norvegicus (rat): 116673
Entry
116673            CDS       T01003                                 
Symbol
Sdc3
Name
(RefSeq) syndecan-3 precursor
  KO
K16337  syndecan 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116673 (Sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    116673 (Sdc3)
Proteoglycans [BR:rno00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   116673 (Sdc3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 116673
NCBI-ProteinID: NP_446345
RGD: 621486
Ensembl: ENSRNOG00000011927
UniProt: P33671 G3V9B7 A6ISP8
Position
5:148249792..148282524
AA seq 442 aa
MKPGPPRRGTAQGQRVDTATHGPGARGLLLPPLLLLLLAGRAAGAQRWRNENFERPVDLE
GSGDDDSFPDDELDDLYSGSGSGYFEQESGLETAMRFIPDIALAAPTAPAMLPTTVIQPV
DTPFEELLSEHPGPEPVTSPPLVTEVTEVVEEPSQRATTISTTTSTTAATTTGAPTMATA
PATAATTAPSTPAAPPATATTADIRTTGIQGLLPLPLTTAATAKATTPAVPSPPTTVATL
DTEAPTPRLVNTATSRPRALPRPVTTQEPEVAERSTLPLGTTAPGPTEVAQTPTPESLLT
TTQDEPEVPVSGGPSGDFELQEETTQPDTANEVVAVEGAAAKPSPPLGTLPKGARPGLGL
HDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaagcccgggccgccgcgccgcgggaccgcacaggggcagcgcgtggacaccgccacc
catgggcccggggcccgcgggttgttactgccaccgctgctgctgctgttgctggccggc
cgcgccgcgggggctcaacgctggcgcaatgagaacttcgagaggccggtggatcttgag
ggctcaggggacgacgactcatttcctgatgatgaactggatgacctctactcggggtcg
ggctctggctacttcgagcaggagtccggccttgagacagccatgcggttcattcctgac
atagccctggctgcacccaccgcacctgccatgctacccacgaccgttatccagcccgtg
gataccccgtttgaggaactcctttctgagcatcccggccccgaaccagtcaccagtccc
ccactggtgacagaggtgacagaagttgtagaagagcccagtcagagagccaccactatc
tccaccaccacatctaccactgcagccaccaccacaggggccccaactatggccacagca
cctgctacagcagccaccactgcccctagcactcccgcggcaccccctgccacggccacc
acggctgacataaggaccaccggcatacaagggctgctgcctcttcccctgaccacggct
gccacagccaaggccactaccccagcagtaccctcaccacccactactgtggctaccttg
gacacagaggccccgacacctaggctggtcaacacagctacctctcggccacgagccctt
cctcggccagtcaccacccaggagcctgaagttgctgagaggagtaccctgccgttgggg
accaccgctcctggacccacagaggtggctcagaccccaactccagagtcccttctgacc
acgacccaggatgagccagaggtgccagtaagcggggggcccagcggggactttgagctg
caagaagagaccacacagccagacacagccaatgaagtggtggcggtggaaggagccgcg
gccaagccatcacctccactggggacactacccaagggtgcccgcccaggccttggcctc
cacgacaatgccatcgactcgggcagctctgctgcccagctccctcagaagagcatacta
gagcggaaggaggtgctcgtagctgtgatcgtaggtggcgtggtgggcgccctcttcgct
gccttcctggtcacgttgctcatctaccgcatgaagaagaaggacgaaggcagctacacc
ttggaagagcccaagcaggcaagcgtcacataccagaagcccgacaagcaggaggagttc
tatgcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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