KEGG T01003: 117180

Rattus norvegicus (rat): 117180

Entry

117180            CDS       T01003

Symbol

Csde1

Name

(RefSeq) cold shock domain-containing protein E1 isoform 1

Organism

rno Rattus norvegicus (rat)

SSDB

Motif

Pfam:

CSDE1 CSD SUZ-C CusF_Ec S1-like

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

RGD:

Ensembl:

UniProt:

Position

2:193234546..193271301

AA seq 798 aa
MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL
QDLKVGDDVEFEVSSDRRTGKPIAIKLVKIKPEIHPEERMNGQVVCAVPHNLESKSPAAP
GQSPTGSVCYERNGEVFYLTYTSEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK
KKQARYQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE
VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG
DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF
GFIKCVDRDARMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF
HSHSDHRFLGTVEKEATFSNPKTTSPNKGKDKEAEDGIIAYDDCGVKLTIAFQAKDVEGS
TSPQIGDKVEFSISDKQRPGQQIATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK
EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEANPTIYSGK
VIRPLRGVDPTQIEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG
QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS
VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD
NSMGFGAERKIRQAGVID

NT seq 2397 nt +upstreamnt +downstreamnt
atgagctttgatccaaaccttctccacaacaatggacacaacgggtaccccaatggtact
tctgcagcactccgtgaaactggggttattgaaaaactgctgacctcttatggatttatt
cagtgttcagaacggcaagctaggcttttcttccactgttcacagtataatggcaacctc
caggacttaaaagtaggagatgatgtggaatttgaagtatcatctgaccggaggactggg
aaacctattgctattaaattggtgaagataaaaccagaaatacatcctgaagaacgaatg
aatggacaagttgtgtgcgctgttcctcacaacttagagagtaaatctccagctgccccg
ggtcagagtccaacagggagtgtatgctacgaacgtaatggggaagtattttatctgact
tacacctctgaagatgtggaagggaacgttcagctggaaactggagacaaaattaacttt
gtaattgataacaataaacacactggtgctgtaagtgctcgtaacattatgctgttgaaa
aagaaacaagctcgctatcaaggagtagtttgtgccatgaaggaggcgtttggctttatt
gaaagaggtgatgttgtaaaagagatattctttcactatagtgaatttaaaggtgatcta
gaaaccctgcagcctggagatgacgtggaattcacaatcaaggacagaaatggtaaagaa
gttgcaacagatgtcagactattgcctcaaggaacagtcatttttgaagatatcagcatt
gaacattttgaaggaactgtaaccaaagttatcccaaaagtacccagtaaaaaccagaat
gacccattgccaggacgaatcaaagttgactttgtgattcctaaagaacttccctttgga
gacaaagacacaaaatccaaagtgaccctgctggaaggtgaccatgttaggtttaatatt
tcaacagaccgacgtgacaaattagaacgagcaaccaacatagaggttctatcaaataca
tttcagttcactaatgaagccagagagatgggtgtgattgctgccatgagagatggtttt
ggcttcatcaagtgtgtggaccgtgatgctcgtatgttcttccacttcagtgagattctc
gatgggaaccagctccacattgcagatgaagtggagtttactgtggtccctgatatgctc
tctgcccaaagaaatcatgctattaggattaaaaaacttcccaagggcacggtttcattc
cattcccattcagatcatcgttttctgggcaccgtagaaaaagaagccactttttctaat
cctaaaactacaagcccaaataaaggcaaagacaaggaggcagaagatggcattattgct
tatgatgactgtggggtgaaactgactattgcttttcaagccaaggatgtggaaggatct
acttctcctcaaataggagataaggttgaatttagtattagtgacaaacagaggcctgga
cagcagattgcaacttgtgtgagacttttaggtcgtaattctaattccaaaaggctcttg
ggttatgtggcaactctgaaagataattttggatttattgaaacagctaatcatgataag
gagatatttttccattatagtgagttctctggtgatgttgatagcctggaactgggagac
atggttgaatacagcttgtccaaaggcaaaggcaataaagtcagtgctgagaaagtaaac
aaaactcactcagtgaatggcatcactgaggaagcaaatcccaccatctactctggtaaa
gtcattcgtcctctgagaggcgttgatccaacacagattgaataccaaggaatgattgag
attgtggaggagggggatatgaaaggtgaagtgtatccttttggcatagttgggatggcc
aacaaaggggattgcctacagaaaggggagagtgttaagttccagttgtgtgtacttggc
caaaatgcacaaactatggcctacaacatcacaccccttcgtagggctactgtggagtgt
gtgaaagatcagtttggctttattaactatgaagtaggagatagcaagaagctctttttc
catgtgaaggaagttcaggatggcattgagctacaggcaggagatgaggtggaattctca
gtgatccttaatcagcgcactgggaaatgtagcgcctgtaatgtttggcgagtctgtgaa
ggccccaaagctgttgcagctcctcgacctgatcggttggttaatcgcttaaagaacatc
accctggatgatgccagtgctccacgtctaatggttcttcgtcagccaaggggaccagat
aactcaatgggatttggtgcagaaagaaagatccgtcaagctggtgtcattgactaa

All links

Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (40)   
   RefSeq(nuc) (8)   
   GenBank (16)   
   EMBL (16)   
Protein domain (5)   
   Pfam (5)   
All databases (60)   

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