KEGG   Rattus norvegicus (rat): 117180
Entry
117180            CDS       T01003                                 

Gene name
Csde1, Unr
Definition
(RefSeq) cold shock domain containing E1, RNA binding
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: CSD SUZ-C S1-like CusF_Ec DrrA_P4M
Other DBs
NCBI-GeneID: 117180
NCBI-ProteinID: NP_446458
RGD: 619726
Ensembl: ENSRNOG00000061058
UniProt: P18395
Position
2q34
AA seq 798 aa
MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL
QDLKVGDDVEFEVSSDRRTGKPIAIKLVKIKPEIHPEERMNGQVVCAVPHNLESKSPAAP
GQSPTGSVCYERNGEVFYLTYTSEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK
KKQARYQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE
VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG
DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF
GFIKCVDRDARMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF
HSHSDHRFLGTVEKEATFSNPKTTSPNKGKDKEAEDGIIAYDDCGVKLTIAFQAKDVEGS
TSPQIGDKVEFSISDKQRPGQQIATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK
EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEANPTIYSGK
VIRPLRGVDPTQIEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG
QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS
VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD
NSMGFGAERKIRQAGVID
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgagctttgatccaaaccttctccacaacaatggacacaacgggtaccccaatggtact
tctgcagcactccgtgaaactggggttattgaaaaactgctgacctcttatggatttatt
cagtgttcagaacggcaagctaggcttttcttccactgttcacagtataatggcaacctc
caggacttaaaagtaggagatgatgtggaatttgaagtatcatctgaccggaggactggg
aaacctattgctattaaattggtgaagataaaaccagaaatacatcctgaagaacgaatg
aatggacaagttgtgtgcgctgttcctcacaacttagagagtaaatctccagctgccccg
ggtcagagtccaacagggagtgtatgctacgaacgtaatggggaagtattttatctgact
tacacctctgaagatgtggaagggaacgttcagctggaaactggagacaaaattaacttt
gtaattgataacaataaacacactggtgctgtaagtgctcgtaacattatgctgttgaaa
aagaaacaagctcgctatcaaggagtagtttgtgccatgaaggaggcgtttggctttatt
gaaagaggtgatgttgtaaaagagatattctttcactatagtgaatttaaaggtgatcta
gaaaccctgcagcctggagatgacgtggaattcacaatcaaggacagaaatggtaaagaa
gttgcaacagatgtcagactattgcctcaaggaacagtcatttttgaagatatcagcatt
gaacattttgaaggaactgtaaccaaagttatcccaaaagtacccagtaaaaaccagaat
gacccattgccaggacgaatcaaagttgactttgtgattcctaaagaacttccctttgga
gacaaagacacaaaatccaaagtgaccctgctggaaggtgaccatgttaggtttaatatt
tcaacagaccgacgtgacaaattagaacgagcaaccaacatagaggttctatcaaataca
tttcagttcactaatgaagccagagagatgggtgtgattgctgccatgagagatggtttt
ggcttcatcaagtgtgtggaccgtgatgctcgtatgttcttccacttcagtgagattctc
gatgggaaccagctccacattgcagatgaagtggagtttactgtggtccctgatatgctc
tctgcccaaagaaatcatgctattaggattaaaaaacttcccaagggcacggtttcattc
cattcccattcagatcatcgttttctgggcaccgtagaaaaagaagccactttttctaat
cctaaaactacaagcccaaataaaggcaaagacaaggaggcagaagatggcattattgct
tatgatgactgtggggtgaaactgactattgcttttcaagccaaggatgtggaaggatct
acttctcctcaaataggagataaggttgaatttagtattagtgacaaacagaggcctgga
cagcagattgcaacttgtgtgagacttttaggtcgtaattctaattccaaaaggctcttg
ggttatgtggcaactctgaaagataattttggatttattgaaacagctaatcatgataag
gagatatttttccattatagtgagttctctggtgatgttgatagcctggaactgggagac
atggttgaatacagcttgtccaaaggcaaaggcaataaagtcagtgctgagaaagtaaac
aaaactcactcagtgaatggcatcactgaggaagcaaatcccaccatctactctggtaaa
gtcattcgtcctctgagaggcgttgatccaacacagattgaataccaaggaatgattgag
attgtggaggagggggatatgaaaggtgaagtgtatccttttggcatagttgggatggcc
aacaaaggggattgcctacagaaaggggagagtgttaagttccagttgtgtgtacttggc
caaaatgcacaaactatggcctacaacatcacaccccttcgtagggctactgtggagtgt
gtgaaagatcagtttggctttattaactatgaagtaggagatagcaagaagctctttttc
catgtgaaggaagttcaggatggcattgagctacaggcaggagatgaggtggaattctca
gtgatccttaatcagcgcactgggaaatgtagcgcctgtaatgtttggcgagtctgtgaa
ggccccaaagctgttgcagctcctcgacctgatcggttggttaatcgcttaaagaacatc
accctggatgatgccagtgctccacgtctaatggttcttcgtcagccaaggggaccagat
aactcaatgggatttggtgcagaaagaaagatccgtcaagctggtgtcattgactaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (25)   
   RefSeq(nuc) (1)   
   GenBank (12)   
   EMBL (12)   
Protein domain (5)   
   Pfam (5)   
All databases (39)   

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