KEGG   Rattus norvegicus (rat): 117275
Entry
117275            CDS       T01003                                 

Gene name
Chrd
Definition
(RefSeq) chordin
  KO
K04657  chordin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    117275 (Chrd)
SSDB
Motif
Pfam: CHRD VWC
Other DBs
NCBI-GeneID: 117275
NCBI-ProteinID: NP_476475
RGD: 620181
Ensembl: ENSRNOG00000001750
UniProt: A0A140TA94
Position
11q23
AA seq 948 aa
MPSLPAPPAPRLLLGLLLLGSRPAGGTGPEAPALPIRSEKEPLPVRGAAGCSFGGKVYAL
DETWHPDLGEPFGVMRCVLCACEAPQWARRGRGPGRVSCKNIKPQCPTLACRQPRQLPGH
CCQTCPQERSNLDPQPAGLVFEYPRDPEHRSYSDRGEPGTGERTRGDGHTDFVALLTGPR
TQAVARARVSLLRSSLRFSISYQRLDRPSRVRFTDPTGNILFEHPAAPTQDGLVCGVWRA
VPRLSVRLLRAEQLRVALVTPTHPSEEVWGPLIWQGALTAETFSAILTLEDPLQRGVGGI
ALLTLSDTEDALHFLLLFRGLLGGLAHVPLKLQILHQGQLLRELQANASAQEPGFAEVLP
SLTDQEMDWLVLGELQMVLEKMGGPELRISGYITTRQSCDVLQSVLCGADALIPVQTGAA
GSASFILLGNGSLIYQVQVIGTGSEVVAMTLETKPQRKNQRTVLCHMAGLQLGGHMAVGV
CSGLGARGAHMLLQNELFLNIGTKDFPDGELRGHVTALCYSGHSAHYDRLPVPLAGALVL
PPVRSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTVTAHLLGPPGMPGPQRLLKGFYG
SEAQGVVKDLEPVLLRHLTQGTASLLITTKSNPRGELRGQVHIASQCEVGGLRLASEGVR
MSLAPNGEAATSPMLPAGPGPEAPVPAKHGSSGRPRDPNTCFFEGQQRPHGARWAPNYDP
LCSLCTCQRRTVICDPVVCPPPSCPHPVQALDQCCPVCPEKQRSRDLPSLPNLEPGEGCY
FDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGATGEVHCEKVQCPRLACAQPVRANPTD
CCKQCPVGSGTHAKLGDPMQADGPRGCRFAGQWFPENQSWHPSVPPFGEMSCITCRCGAG
VPHCERDDCSPPLSCGSGKESRCCSHCTAQRSSETRTLPELEKEAQRS
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgccgagcctcccggccccgccggcccctcggctgctcctcgggctgctgctgctcggc
tcgcggccggccggtggcactggccctgaggcccccgcactgcccatccgttccgagaag
gagccactgcctgtccggggagcggcaggctgctccttcggcgggaaggtctatgccttg
gacgagacgtggcacccggacctgggggagccttttggggtgatgcgctgtgtgctgtgc
gcctgcgaagcgcctcagtgggctcgccgtgggaggggccctggcagggtcagctgcaag
aacatcaaacctcagtgccccaccctggcctgcaggcagccgcgccagctgccaggacac
tgctgccagacctgcccgcaggagcgcagcaatctagatccacagccggctggcctggtc
ttcgagtatccaagggacccagagcatcgcagttatagcgatcgaggggaacccggcact
ggggagcggacacgtggtgatggccacacggactttgtggcgttgctgactggaccgagg
acgcaggcggtagctcgtgctcgagtctctttgctgcgctcaagtttacgcttctctatc
tcctaccagcggctggaccgtcccagcagggttcggttcacagaccccacaggcaacatc
ctgtttgaacaccctgctgcccccacccaagatggcctggtctgtggggtgtggcgggca
gtgcctcggctgtctgtgaggctcctgagggcagagcagctgcgtgttgcccttgtgaca
cccactcacccttcagaagaagtctgggggcctctcatttggcagggtgctctcactgca
gagaccttcagtgccatcctgaccctggaggacccactgcagcggggtgtcgggggcata
gccctgctcactctcagtgacacagaagatgccttacattttttgctgctcttccggggt
ctgctgggaggactagctcacgtccccttgaagcttcagattctccaccagggacagcta
cttcgagagctccaggccaatgcctcagctcaggagccaggttttgctgaggtgctgccc
agccttacagaccaagagatggactggttggtgctgggggagctgcagatggtcctagag
aagatgggtgggccagagctacgcatcagcgggtatatcacgaccaggcagagctgtgat
gtccttcaaagcgtcctctgtggggctgatgccttgatcccagtccagacgggtgctgct
ggctcagccagcttcatactgctaggaaatggctcccttatctatcaggtacaagtgata
ggtacaggtagcgaggtggtggccatgacgctggagaccaagcctcagcggaagaaccag
cgcactgtcctgtgccacatggctggactccagctgggaggacacatggctgtgggtgtc
tgctctgggctgggtgcccgaggggctcacatgctgctacagaatgagttgttcctgaat
attggtaccaaggacttcccagacggagagcttcgggggcacgtgactgccctatgctac
agcgggcacagtgcccactacgacagattgcctgtgcctctggcaggggcactagtactg
ccccctgtgcggagtcaggcagcaggacatgcctggctgtccttggatacacattgccac
ttacactatgaggttctattggctgggcttggtggctcagagcaaggaactgtcactgct
catctcctcgggcctcctgggatgccagggccccagcgactgctgaagggattctatggc
tcagaggctcagggtgtggtaaaagatctagagcccgtgctgctgcggcacctgacacag
ggcaccgcctccctgcttatcaccaccaagagtaaccctagaggagagctacgcgggcag
gtgcacattgccagtcagtgtgaggtgggaggcctgcgcctggcctcagaaggagtgcgg
atgtccttggctccaaatggagaggcagctacatcacccatgctgcctgctgggcccggc
cctgaagcccccgtaccagccaaacacggcagctctgggagaccccgagatcctaacaca
tgtttcttcgaggggcagcagcgtccccacggggctcgctgggcacccaactatgaccca
ctctgctccctctgcacctgccagagacggacagtgatctgtgatcctgtagtatgccca
ccaccaagctgtccccacccggtgcaggcactggaccagtgctgtcccgtgtgtccagag
aaacaacgcagtagagaccttcccagcctaccaaatctggagccaggagagggctgctat
tttgatggtgaccggagctggagggcagcgggtacccgatggcaccccgttgtgcccccc
tttggcctaattaagtgtgctgtctgcacctgcaagggggccaccggagaggtgcactgt
gagaaggtgcagtgtcctcgcctcgcctgtgctcagcctgtccgtgccaaccccaccgac
tgctgcaaacagtgcccagtagggtcagggactcatgccaagctgggagaccccatgcag
gctgatgggcctcggggttgtcgctttgctgggcagtggttcccagagaatcagagctgg
cacccatcagtgcccccctttggggagatgagctgtattacctgcagatgtggggcaggg
gtaccccactgtgagcgggacgattgctcgccgccactatcctgcggctcagggaaggag
agtcgatgctgttcccactgtacagcccaaaggtcctctgagactagaacccttcccgag
ctggagaaagaagctcaacgctcctag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (12)   
   RefSeq(nuc) (4)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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