KEGG   Rattus norvegicus (rat): 171051
Entry
171051            CDS       T01003                                 
Symbol
Cabp1
Name
(RefSeq) calcium-binding protein 1 isoform 3
  KO
K23531  calcium-binding protein 1/2/4/5
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    171051 (Cabp1)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    171051 (Cabp1)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    171051 (Cabp1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 EF-hand domain-containing proteins
  Calcium binding proteins
   171051 (Cabp1)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_5 EF-hand_8 AIF-1 EF-hand_9 Dockerin_1 DUF5580_M SPARC_Ca_bdg DIMCO_N POTRA_2
Other DBs
NCBI-GeneID: 171051
NCBI-ProteinID: NP_001028848
RGD: 620385
Ensembl: ENSRNOG00000001173
UniProt: O88751 A0A140TA91
Position
12:47045914..47109614
AA seq 350 aa
MGGGDGAAFKRPGDGARLQRVLGLGSRRAPRSLPSGGPAPPPPGHASAGPAAMSSHIAKS
ESKTSLLKAAAASGGSRAPRHSSARDPGLRGRRLPGPCPDSPATCGDPSSRRPLCRPVPR
DEGARGSRRGLPQAHCRPRETLPPARGRDGEERGLAPALSLRGSLRSRGRGDPAPAGTPE
ADPFLHQLRPMLSSAFGQDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYM
PTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDG
EISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgggcggcggcgacggggccgcatttaagcggccaggggacggcgcccgcctgcagcgc
gtcctcgggctcggctcccgccgggcgccccgctccctgccctccgggggccccgcgcca
cccccgccgggccatgcgagcgcgggccccgccgcgatgagctcgcacatcgccaagagc
gagtccaagacgtcgctgctcaaggcggcggcggcgagcgggggcagccgggctccccgc
cacagctctgcgcgggaccccgggctgcgtggccgcaggctgcccggtccctgccccgac
tcgcctgcaacgtgcggggaccccagctcgcggaggcccctgtgccggccggtgccgcgg
gacgagggcgcgcgcgggagccggcgtgggctgccccaggcgcactgcaggccccgggag
acgctaccgccggcccgcgggcgcgatggggaggaacgggggctggcgccggctctcagt
ctacggggctccctgcgatcgcggggtcgcggggacccggctcccgctggcacccccgag
gcggacccgttcctccaccagctgcgccccatgctcagctccgccttcggtcaggataga
tcgttacgaccagaggagatcgaagagctccgagaggccttccgggaatttgacaaggac
aaagatggctacatcaactgccgggacctggggaactgcatgcgcaccatgggctacatg
cccactgagatggaactcatcgagctgtcccagcagatcaacatgaacctgggtggccac
gtggatttcgatgactttgtggaactgatgggccctaaactcctggcggagacagcagat
atgatcggtgtaaaggaactgagagacgcctttcgggagtttgacaccaacggtgacggg
gagataagcacgagcgagctgcgagaggccatgaggaagctcctgggtcatcaggtggga
caccgggacatagaggaaattatccgagacgtggacctcaatggagatggacgagtggac
ttcgaagagtttgtccggatgatgtctcgctga

  All links  
Gene (59)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (14)   
   RefSeq(nuc) (4)   
   GenBank (5)   
   EMBL (5)   
Protein domain (12)   
   Pfam (12)   
All databases (92)   

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