KEGG   Rattus norvegicus (rat): 171163
Entry
171163            CDS       T01003                                 
Symbol
Slc6a13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
  KO
K05046  solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04721  Synaptic vesicle cycle
rno04727  GABAergic synapse
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    171163 (Slc6a13)
   04721 Synaptic vesicle cycle
    171163 (Slc6a13)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    171163 (Slc6a13)
Transporters [BR:rno02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   171163 (Slc6a13)
SSDB
Motif
Pfam: SNF
Other DBs
NCBI-GeneID: 171163
NCBI-ProteinID: NP_598307
RGD: 620788
Ensembl: ENSRNOG00000012876
UniProt: P31646 A6ILC5
Position
4:156211381..156248491
AA seq 602 aa
MDNRVSGTTSNGETKPVCPVMEKVEEDGTLEREQWTNKMEFVLSVAGEIIGLGNVWRFPY
LCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTNQGGITAWRKICPIFEGIGYASQM
IVSLLNVYYIVVLAWALFYLFSSFTTDLPWGSCSHEWNTENCVEFQKTNNSLNVTSENAT
SPVIEFWERRVLKISDGIQHLGSLRWELVLCLLLAWIICYFCIWKGVKSTGKVVYFTATF
PYLMLVVLLIRGVTLPGAAQGIQFYLYPNITRLWDPQVWMDAGTQIFFSFAICLGCLTAL
GSYNKYHNNCYRDCVALCILNSSTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFI
AYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPRVFRKKNRREILI
LIVSVVSFFIGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGASRFYDNI
EDMIGYKPWPLIKYCWLFFTPAVCLATFLFSLIKYTPLTYNKKYTYPWWGDALGWLLALS
SMVCIPAWSIYKLRTLKGPLRERLRQLVCPAEDLPQKSQPELTSPATPMTSLLRLTELES
NC
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggataacagggtctcgggaacgaccagtaatggagagacaaagccagtgtgtccagtc
atggagaaggtggaggaagacggtaccttggaacgggagcaatggaccaacaagatggag
ttcgtactgtcagtggcgggagagatcattggcttaggcaacgtctggaggtttccctat
ctctgctacaagaacgggggaggtgccttctttattccctacctcatcttcctatttacc
tgtggcattcctgtcttcttcctggagacagcgcttggccagtacaccaaccagggaggc
atcacagcctggaggaaaatctgtcccatcttcgagggcatcggctatgcctcacagatg
atcgtcagccttctcaatgtctactacatcgttgtcctggcctgggccctcttctacctc
ttcagcagcttcaccactgacctcccctggggtagctgcagccacgagtggaatacagaa
aactgtgtggagttccagaaaaccaacaattccctgaatgtgacttctgagaatgccaca
tcccctgtcatcgagttctgggagaggcgagtcctgaagatctcagatggcatccagcac
ctggggtccctgcgctgggagctggtcctgtgcctcctgcttgcctggatcatctgctat
ttctgcatctggaaaggggtcaagtccacaggcaaggtggtgtacttcacagctactttc
ccttacctcatgctggtggtcctgttgatccgaggagtaacactgcctggagcagcccag
ggaattcagttttacctgtaccccaacatcacacgtctgtgggatccccaggtgtggatg
gatgcgggcacccagatcttcttctcctttgccatctgcctggggtgcctcacggccctg
ggcagctacaacaagtaccacaacaactgctacagggactgcgtcgccctttgcattctc
aacagcagcaccagcttcgtggccgggtttgccatcttctccatcctgggcttcatgtct
caggagcagggcgtacccatatctgaggttgctgaatcaggccctggcctggcattcatc
gcctaccctcgagctgtggtgatgttacctttctcgcctttgtgggcctgctgtttcttc
ttcatggtggttctcctgggactagacagccagtttgtgtgtgtagaaagcctcgtgaca
gcgctggtggacatgtatccccgggtgttccgtaagaagaaccggagggagattctcatc
ctcatcgtgtctgtcgtctctttcttcatcgggctcattatgctcacagagggcggcatg
tacgtgttccagctcttcgactactatgcggccagtggcatgtgtcttctctttgtggcc
atctttgagtccctctgtgtggcttgggtttacggagccagccgcttctatgacaacatt
gaagatatgattgggtacaagccgtggcctcttatcaaatactgttggctctttttcacg
ccagctgtgtgcctggcaaccttcctgttctccctgatcaaatacacgccactgacctac
aacaagaagtacacatatccatggtggggggatgccctggggtggctcctagctctgtcc
tccatggtctgcattcctgcctggagcatctacaagctcaggactctcaagggcccactc
agagagagacttcgccagctcgtgtgcccggctgaagaccttccccagaagagccaacca
gagctgacttctccagcgacaccgatgacgtccctcctcaggctcacagaactggagtct
aactgctag

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