KEGG   Rattus norvegicus (rat): 171337
Entry
171337            CDS       T01003                                 

Gene name
Rap1b
Definition
(RefSeq) ras-related protein Rap-1b
  KO
K07836  Ras-related protein Rap-1B
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04010  MAPK signaling pathway
rno04014  Ras signaling pathway
rno04015  Rap1 signaling pathway
rno04024  cAMP signaling pathway
rno04062  Chemokine signaling pathway
rno04510  Focal adhesion
rno04611  Platelet activation
rno04670  Leukocyte transendothelial migration
rno04720  Long-term potentiation
rno04722  Neurotrophin signaling pathway
rno04934  Cushing syndrome
rno04972  Pancreatic secretion
rno05211  Renal cell carcinoma
rno05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    171337 (Rap1b)
   04014 Ras signaling pathway
    171337 (Rap1b)
   04015 Rap1 signaling pathway
    171337 (Rap1b)
   04024 cAMP signaling pathway
    171337 (Rap1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    171337 (Rap1b)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    171337 (Rap1b)
   04670 Leukocyte transendothelial migration
    171337 (Rap1b)
   04062 Chemokine signaling pathway
    171337 (Rap1b)
  09154 Digestive system
   04972 Pancreatic secretion
    171337 (Rap1b)
  09156 Nervous system
   04720 Long-term potentiation
    171337 (Rap1b)
   04722 Neurotrophin signaling pathway
    171337 (Rap1b)
 09160 Human Diseases
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    171337 (Rap1b)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    171337 (Rap1b)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    171337 (Rap1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    171337 (Rap1b)
   04031 GTP-binding proteins [BR:rno04031]
    171337 (Rap1b)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   171337 (Rap1b)
  Exosomal proteins of other body fluids (saliva and urine)
   171337 (Rap1b)
  Exosomal proteins of colorectal cancer cells
   171337 (Rap1b)
GTP-binding proteins [BR:rno04031]
 Small (monomeric) G-proteins
  Ras Family
   Rap [OT]
    171337 (Rap1b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 G-alpha
Other DBs
NCBI-GeneID: 171337
NCBI-ProteinID: NP_599173
RGD: 620577
Ensembl: ENSRNOG00000007048
UniProt: Q62636
Structure
PDB: 
3X1X 3X1Y 3X1W 3X1Z

Position
7
AA seq 184 aa
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG
TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDL
EDERVVGKEQGQNLARQWSNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKSS
CQLL
NT seq 555 nt   +upstreamnt  +downstreamnt
atgcgtgaatataagctagtcgttcttggctcaggaggtgttgggaagtcggctctgact
gtacagtttgttcaaggaatttttgttgaaaaatatgatcctacgatagaagattcttat
agaaagcaagttgaagtagatgcacagcagtgtatgcttgaaatcctggatactgcagga
acggagcagtttacagccatgagagatctgtacatgaagaacggacaaggctttgcgttg
gtttactccatcacagcacagtcgacatttaatgacttacaggatctaagagagcagatt
cttcgggttaaagacactgacgatgtcccaatgattctggttggtaacaaatgcgacctg
gaagacgaaagagttgtcgggaaggaacaaggtcagaacctggcaagacagtggagcaac
tgcgctttcttagagtcctccgccaagtccaagataaatgttaacgagatcttttatgac
ctagtgcggcaaattaacagaaaaaccccagtgcctgggaaggcccgcaaaaagtcatca
tgtcagctgctttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (14)   
   KEGG PATHWAY (14)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (23)   
   RefSeq(nuc) (5)   
   GenBank (9)   
   EMBL (9)   
Protein domain (6)   
   Pfam (6)   
All databases (60)   

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KEGG   Rattus norvegicus (rat): 295347
Entry
295347            CDS       T01003                                 

Gene name
Rap1a
Definition
(RefSeq) ras-related protein Rap-1A
  KO
K04353  Ras-related protein Rap-1A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04010  MAPK signaling pathway
rno04014  Ras signaling pathway
rno04015  Rap1 signaling pathway
rno04024  cAMP signaling pathway
rno04062  Chemokine signaling pathway
rno04510  Focal adhesion
rno04530  Tight junction
rno04611  Platelet activation
rno04670  Leukocyte transendothelial migration
rno04720  Long-term potentiation
rno04722  Neurotrophin signaling pathway
rno04934  Cushing syndrome
rno04972  Pancreatic secretion
rno05211  Renal cell carcinoma
rno05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    295347 (Rap1a)
   04014 Ras signaling pathway
    295347 (Rap1a)
   04015 Rap1 signaling pathway
    295347 (Rap1a)
   04024 cAMP signaling pathway
    295347 (Rap1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    295347 (Rap1a)
   04530 Tight junction
    295347 (Rap1a)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    295347 (Rap1a)
   04670 Leukocyte transendothelial migration
    295347 (Rap1a)
   04062 Chemokine signaling pathway
    295347 (Rap1a)
  09154 Digestive system
   04972 Pancreatic secretion
    295347 (Rap1a)
  09156 Nervous system
   04720 Long-term potentiation
    295347 (Rap1a)
   04722 Neurotrophin signaling pathway
    295347 (Rap1a)
 09160 Human Diseases
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    295347 (Rap1a)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    295347 (Rap1a)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    295347 (Rap1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:rno04031]
    295347 (Rap1a)
GTP-binding proteins [BR:rno04031]
 Small (monomeric) G-proteins
  Ras Family
   Rap [OT]
    295347 (Rap1a)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 G-alpha RsgA_GTPase
Other DBs
NCBI-GeneID: 295347
NCBI-ProteinID: NP_001005765
RGD: 1359694
Ensembl: ENSRNOG00000032463
UniProt: P62836
Position
2
AA seq 184 aa
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG
TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDL
EDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKS
CLLL
NT seq 555 nt   +upstreamnt  +downstreamnt
atgcgtgagtacaagctagtggtccttggttcaggaggcgtgggaaagtctgctctgaca
gttcagtttgttcagggaatttttgttgaaaaatatgacccaacgatagaagattcctac
agaaagcaagtcgaagtagattgccaacagtgtatgctggaaatcctggacaccgcaggg
acagagcaatttacagcaatgagggatttgtatatgaagaatggccaagggtttgcacta
gtttattcaattacagctcagtctacgtttaatgacttacaagacttgagagaacagatt
ttacgggttaaagacacagaagatgttccaatgattttggttggcaataaatgtgatctg
gaagatgagcgggtagttggcaaagaacaaggccagaatttagcaagacagtggtgtaac
tgtgcctttttagaatcttctgcaaagtcaaagatcaacgttaatgagatattttatgac
ctggtcagacagataaatagaaaaacaccagtggaaaagaagaagcctaaaaagaaatca
tgtctgctgctctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (15)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (7)   
   Pfam (7)   
All databases (45)   

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