KEGG   Rattus norvegicus (rat): 171360
Entry
171360            CDS       T01003                                 
Symbol
Vsx2
Name
(RefSeq) visual system homeobox 2
  KO
K09336  visual system homeobox protein 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    171360 (Vsx2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    171360 (Vsx2)
SSDB
Motif
Pfam: Homeodomain OAR Homeobox_KN
Other DBs
NCBI-GeneID: 171360
NCBI-ProteinID: NP_001162599
RGD: 621215
Ensembl: ENSRNOG00000011918
UniProt: A6JDX4 G3V7K0
Position
6:109932943..109972005
AA seq 361 aa
MTGKAGEALSKPKSETVAKSTSGGAPARCTGFGIQEILGLNKEPPSSHPRAALDGLAPGH
LLAARSVLSPAGVGSMGLLGPGGLPGFYAQPTFLEVLSDPQSVHLQPLGRASGPLDTSQT
ASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKAFNEAHYPDVYAREM
LAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESILKSA
KDGIMDSCAPWLLGMHKKSLEAAAESGRKPEVERQVLPKLDKMEQEERAPDAQAAISQEE
LRENSIAALRAKAQEHSTKVLGTVSGPDGLARNAEKPEEEEAMDEDRPAEKLSPPQLEDM
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgacggggaaagcgggggaagcgctgagcaagcctaaatccgagacagtggccaagagt
acctcggggggtgccccggccaggtgcacagggttcggcatccaggagatcctaggcttg
aacaaggagcctcccagctcccacccgcgggctgccctggacggcctggcccccgggcat
ttgttagctgcgcgctctgttctcagccccgcaggagtgggcagcatggggctgctgggg
cccggagggcttcccggcttctacgcacagcccaccttcctggaagtgctgtccgatccg
cagagcgtccacttgcagccactaggcagagcgtcggggccgctggacaccagccagacg
gccagctccgattccgaagatgtttcctccagtgaccgaaaaatgtccaaatcggcttta
aaccagaccaagaaacgtaagaagcggcgacacaggacaatctttacttcctaccagcta
gaggagctggagaaggcattcaatgaagcccactacccagatgtctacgcccgggagatg
ctggccatgaaaacggagctaccagaagacaggatacaggtgtggttccagaaccgcaga
gccaaatggaggaagagggagaagtgctggggccggagcagcgtcatggctgagtacggc
ctctatggagccatggtgaggcactccatccccctgccagagtccatcctcaagtcggcc
aaggacggcatcatggattcctgcgccccttggctactggggatgcacaaaaagtcgctg
gaggcagcagccgagtccggaaggaagcccgaggtggaacgccaggtcctgcccaaactc
gacaagatggagcaggaggaaagggccccggatgctcaggcagccatctcccaggaagaa
ctgagggagaacagcattgcggccctccgagccaaagctcaggagcacagcaccaaggtt
ctggggactgtatccgggcctgacggcctagccaggaatgctgagaagccagaagaggag
gaagccatggacgaagacaggccagcagagaagctcagcccaccgcagctggaggacatg
gcttag

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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