KEGG   Rattus norvegicus (rat): 24242Help
Entry
24242             CDS       T01003                                 

Gene name
Calm1, CaMI
Definition
(RefSeq) calmodulin 1
  KO
K02183  calmodulin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04014  Ras signaling pathway
rno04015  Rap1 signaling pathway
rno04020  Calcium signaling pathway
rno04022  cGMP-PKG signaling pathway
rno04024  cAMP signaling pathway
rno04070  Phosphatidylinositol signaling system
rno04114  Oocyte meiosis
rno04218  Cellular senescence
rno04261  Adrenergic signaling in cardiomyocytes
rno04270  Vascular smooth muscle contraction
rno04371  Apelin signaling pathway
rno04625  C-type lectin receptor signaling pathway
rno04713  Circadian entrainment
rno04720  Long-term potentiation
rno04722  Neurotrophin signaling pathway
rno04728  Dopaminergic synapse
rno04740  Olfactory transduction
rno04744  Phototransduction
rno04750  Inflammatory mediator regulation of TRP channels
rno04910  Insulin signaling pathway
rno04912  GnRH signaling pathway
rno04915  Estrogen signaling pathway
rno04916  Melanogenesis
rno04921  Oxytocin signaling pathway
rno04922  Glucagon signaling pathway
rno04924  Renin secretion
rno04925  Aldosterone synthesis and secretion
rno04970  Salivary secretion
rno04971  Gastric acid secretion
rno05010  Alzheimer disease
rno05031  Amphetamine addiction
rno05034  Alcoholism
rno05133  Pertussis
rno05152  Tuberculosis
rno05163  Human cytomegalovirus infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05170  Human immunodeficiency virus 1 infection
rno05200  Pathways in cancer
rno05214  Glioma
rno05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    24242 (Calm1)
   04015 Rap1 signaling pathway
    24242 (Calm1)
   04371 Apelin signaling pathway
    24242 (Calm1)
   04020 Calcium signaling pathway
    24242 (Calm1)
   04070 Phosphatidylinositol signaling system
    24242 (Calm1)
   04024 cAMP signaling pathway
    24242 (Calm1)
   04022 cGMP-PKG signaling pathway
    24242 (Calm1)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    24242 (Calm1)
   04218 Cellular senescence
    24242 (Calm1)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    24242 (Calm1)
  09152 Endocrine system
   04910 Insulin signaling pathway
    24242 (Calm1)
   04922 Glucagon signaling pathway
    24242 (Calm1)
   04912 GnRH signaling pathway
    24242 (Calm1)
   04915 Estrogen signaling pathway
    24242 (Calm1)
   04921 Oxytocin signaling pathway
    24242 (Calm1)
   04916 Melanogenesis
    24242 (Calm1)
   04924 Renin secretion
    24242 (Calm1)
   04925 Aldosterone synthesis and secretion
    24242 (Calm1)
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    24242 (Calm1)
   04270 Vascular smooth muscle contraction
    24242 (Calm1)
  09154 Digestive system
   04970 Salivary secretion
    24242 (Calm1)
   04971 Gastric acid secretion
    24242 (Calm1)
  09156 Nervous system
   04728 Dopaminergic synapse
    24242 (Calm1)
   04720 Long-term potentiation
    24242 (Calm1)
   04722 Neurotrophin signaling pathway
    24242 (Calm1)
  09157 Sensory system
   04744 Phototransduction
    24242 (Calm1)
   04740 Olfactory transduction
    24242 (Calm1)
   04750 Inflammatory mediator regulation of TRP channels
    24242 (Calm1)
  09159 Environmental adaptation
   04713 Circadian entrainment
    24242 (Calm1)
 09160 Human Diseases
  09161 Cancers: Overview
   05200 Pathways in cancer
    24242 (Calm1)
  09162 Cancers: Specific types
   05214 Glioma
    24242 (Calm1)
  09164 Neurodegenerative diseases
   05010 Alzheimer disease
    24242 (Calm1)
  09165 Substance dependence
   05031 Amphetamine addiction
    24242 (Calm1)
   05034 Alcoholism
    24242 (Calm1)
  09166 Cardiovascular diseases
   05418 Fluid shear stress and atherosclerosis
    24242 (Calm1)
  09171 Infectious diseases: Bacterial
   05133 Pertussis
    24242 (Calm1)
   05152 Tuberculosis
    24242 (Calm1)
  09172 Infectious diseases: Viral
   05170 Human immunodeficiency virus 1 infection
    24242 (Calm1)
   05163 Human cytomegalovirus infection
    24242 (Calm1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    24242 (Calm1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    24242 (Calm1)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    24242 (Calm1)
   03036 Chromosome and associated proteins [BR:rno03036]
    24242 (Calm1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    24242 (Calm1)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Calcineurin (PPP3/ PP2B)
    Regulatory subunits
     24242 (Calm1)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    24242 (Calm1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic Type
  Centrosome formation and ciliogenesis proteins
   Centrosome duplication proteins
    Centriole replication proteins
     24242 (Calm1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   24242 (Calm1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: EF-hand_1 EF-hand_7 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 EF-hand_4 SPARC_Ca_bdg EF-hand_11 UPF0154 EFhand_Ca_insen Dockerin_1 DUF1103 Caleosin DUF4497 TerB DUF5580 SurA_N_2 Poly_export DUF2267 SurA_N_3 Fe_hyd_lg_C MotA_activ
Motif
Other DBs
NCBI-GeneID: 24242
NCBI-ProteinID: NP_114175
RGD: 2257
Ensembl: ENSRNOG00000004060
UniProt: P0DP29 P0DP30 P0DP31
Structure
PDB: 

Position
6q32
AA seq 149 aa AA seqDB search
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
EVDEMIREADIDGDGQVNYEEFVQMMTAK
NT seq 450 nt NT seq  +upstreamnt  +downstreamnt
atggctgatcagctgactgaagaacagattgctgaattcaaggaagctttctccctattt
gataaagatggggacggcaccatcacaacaaaggagctggggactgtcatgcggtcactg
ggtcagaacccaacagaggctgaactgcaggatatgatcaacgaggtggatgccgacggg
aatggcaccattgacttcccagagttcttgactatgatggctagaaaaatgaaagacaca
gatagcgaagaagaaatccgtgaggcattccgagtctttgacaaggatggcaatggctac
atcagtgcggcagaactgcgccacgtcatgacaaacctcggggaaaagctaacagatgaa
gaagtagacgaaatgatcagagaagcagatattgatggagacggacaggtcaactatgaa
gaattcgtacagatgatgactgcaaaatga

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