KEGG   Rattus norvegicus (rat): 24253Help
Entry
24253             CDS       T01003                                 

Gene name
Cebpb, Il6dbp, NF-IL6, TCF5
Definition
(RefSeq) CCAAT/enhancer binding protein beta
  KO
K10048  CCAAT/enhancer binding protein (C/EBP), beta
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04657  IL-17 signaling pathway
rno04668  TNF signaling pathway
rno05152  Tuberculosis
rno05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    24253 (Cebpb)
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    24253 (Cebpb)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    24253 (Cebpb)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    24253 (Cebpb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    24253 (Cebpb)
Transcription factors [BR:rno03000]
 Eukaryotic Type
  Basic leucine zipper (bZIP)
   C/EBP-like factors
    24253 (Cebpb)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: bZIP_2 bZIP_1 CCD48 SBDS_C Nup54 DUF3450 bZIP_Maf Uds1 DUF2730
Motif
Other DBs
NCBI-GeneID: 24253
NCBI-ProteinID: NP_077039
RGD: 2327
Ensembl: ENSRNOG00000057347
UniProt: P21272
Position
3q42
AA seq 297 aa AA seqDB search
MHRLLAWDAACLPPPPAAFRPMEVANFYYEPDCLAYGAKAARAAPRAPAAEPAIGEHERA
IDFSPYLEPLAPAAADFAAPAPAHHDFLSDLFADDYGAKPSKKPSDYGYVSLGRAGAKAA
PPACFPPPPPAALKAEPGFEPADCKRADDAPAMAAGFPFALRAYLGYQATPSGSSGSLST
SSSSSPPGTPSPADAKAAPAACFAGPPAAPAKAKAKKAVDKLSDEYKMRRERNNIAVRKS
RDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASAGHC
NT seq 894 nt NT seq  +upstreamnt  +downstreamnt
atgcaccgcctgctggcctgggacgcagcatgcctcccgccgccgcccgccgcctttaga
cccatggaagtggccaacttctactacgagcccgactgcctggcctacggggccaaggcg
gcccgcgccgcgccgcgcgcccccgccgccgagccggccatcggcgagcacgagcgcgcc
atcgacttcagcccctacctggagccgctcgcgcccgccgccgcggacttcgccgcgccc
gcgcccgcgcaccacgacttcctttccgacctcttcgccgacgactacggcgccaagccg
agcaagaagccgtccgactacggttacgtgagcctcggccgcgcgggcgccaaggccgca
ccgcccgcctgcttcccgccgccgcctcccgccgcactcaaggccgagccgggcttcgaa
cccgcggactgcaagcgcgcggacgacgcgcccgccatggcggccggcttcccgttcgcc
ctgcgcgcctacctgggctaccaggcgacgccgagcggcagcagcggcagcctgtccacg
tcgtcgtcgtccagcccgcccgggacgccgagccccgccgacgccaaggccgcgcccgcc
gcctgcttcgcggggccgccggccgcgcccgccaaggccaaggccaagaaggcggtggac
aagctgagcgacgagtacaagatgcggcgcgagcgcaacaacatcgcggtgcgcaagagc
cgcgacaaggccaagatgcgcaacctggagacgcagcacaaggtgctggagctgacggcg
gagaacgagcggctgcagaagaaggtggagcagctgtcgcgagagctcagcacgctgcgg
aacttgttcaagcagctgcccgagccgctgctggcctcggcgggtcactgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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