KEGG   Rattus norvegicus (rat): 24473Help
Entry
24473             CDS       T01003                                 

Gene name
Htr1a, 5HT1A, RAT5HT1A
Definition
(RefSeq) 5-hydroxytryptamine receptor 1A
  KO
K04153  5-hydroxytryptamine receptor 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04024  cAMP signaling pathway
rno04080  Neuroactive ligand-receptor interaction
rno04726  Serotonergic synapse
rno04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    24473 (Htr1a)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    24473 (Htr1a)
 09150 Organismal Systems
  09156 Nervous system
   04726 Serotonergic synapse
    24473 (Htr1a)
  09157 Sensory system
   04742 Taste transduction
    24473 (Htr1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:rno04030]
    24473 (Htr1a)
G protein-coupled receptors [BR:rno04030]
 Rhodopsin family
  Biogenic amine
   Serotonin
    24473 (Htr1a)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx 7TM_GPCR_Srx 7tm_4
Motif
Other DBs
NCBI-GeneID: 24473
NCBI-ProteinID: NP_036717
RGD: 2845
Ensembl: ENSRNOG00000010254
UniProt: P19327
Position
2q13
AA seq 422 aa AA seqDB search
MDVFSFGQGNNTTASQEPFGTGGNVTSISDVTFSYQVITSLLLGTLIFCAVLGNACVVAA
IALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCC
TSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLISIPPMLGWRTPED
RSDPDACTISKDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVRKVEKKGAGT
SLGTSSAPPPKKSLNGQPGSGDWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGN
SKEHLPLPSESGSNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLP
FFIVALVLPFCESSCHMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC
RR
NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt
atggatgtgttcagttttggccagggcaacaacaccacagcgtcccaggagccctttggg
accggcggcaacgttactagcatctccgacgtgaccttcagctaccaagtgatcacctct
ctgttgctgggtactctcattttctgcgcggtgctcggcaatgcctgcgtggttgctgcc
atcgccctggagcgctccctccagaatgtggccaactatctcatcggctccttggcggtt
actgatctcatggtatcagtgctggtgctgcccatggctgctctgtaccaggtgctcaac
aagtggaccctgggccaggtcacctgcgacctgtttatcgccctggatgtactgtgctgc
acctcgtccatcctgcacctgtgcgccatcgcgctagacaggtactgggctatcaccgac
cctatagactatgtgaacaaaaggacgccccggcgcgccgctgcgctgatctcgctcact
tggctcattggctttctcatctccatcccgcccatgctgggctggcgcaccccggaagac
cgatcggaccccgacgcgtgcaccatcagcaaggaccacggctacaccatctactccact
ttcggcgctttctatatcccgctgttgctcatgctggttctctacgggcgcatcttcaga
gccgcacgcttccgaatccgcaagactgtcaggaaggtggaaaagaagggagcaggcacc
agcttaggaacttcgtcggcaccgccccccaagaagagcctgaacggacagccaggtagt
ggggactggaggcgctgtgctgagaacagggcggtggggactccgtgcactaatggggca
gtgaggcagggtgacgacgaggccaccctggaggtgatcgaggtgcaccgagtgggcaac
tccaaagagcaccttcctctgcccagcgagtcaggatctaactcctatgcccccgcctgc
ttggagagaaaaaatgagcgcaatgctgaagcaaagcgcaagatggccttggcccgtgaa
aggaagacggtgaagactctgggcatcatcatgggcaccttcatcctctgctggctgccg
tttttcattgtggctctggtcctgcctttctgtgaaagcagctgccacatgcctgcgttg
ttgggtgccataattaactggctaggctactccaactccctgctcaatccggttatttat
gcttatttcaacaaagactttcaaaacgcttttaagaagataatcaagtgcaagttctgc
cgccgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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