KEGG   Rattus norvegicus (rat): 25102
Entry
25102             CDS       T01003                                 

Gene name
Chrna5
Definition
(RefSeq) cholinergic receptor nicotinic alpha 5 subunit
  KO
K04807  nicotinic acetylcholine receptor alpha-5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    25102 (Chrna5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    25102 (Chrna5)
Ion channels [BR:rno04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   25102 (Chrna5)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb
Other DBs
NCBI-GeneID: 25102
NCBI-ProteinID: NP_058774
RGD: 2347
Ensembl: ENSRNOG00000013610
Vega: OTTRNOG00000002261
Position
8q24
AA seq 467 aa
MAVRGSRRRALRLLLMVQLLAGRWRPTGAARGTRGGLPELSSAAKHEDSLFRDLFEDYER
WVRPVEHLSDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKI
IRVPSDSLWIPDIVLFDNADGRFEGASTKTVVRYNGTVTWTQPANYKSSCTIDVTFFPFD
LQNCSMKFGSWTYDGSQVDIILEDQDVDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPYI
TYSFVIKRLPLFYTLFLIIPCIGLSFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIE
EIIPSSSKVIPLIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKL
PKLLCMRSHADRYFTQREEAESGAGPKSRNTLEAALDCIRYITRHVVKENDVREVVEDWK
FIAQVLDRMFLWTFLLVSIIGTLGLFVPVIYKWANIIVPVHIGNTIK
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggcggtgcgggggtcgcggcggcgcgcgctgcgcctgctcttgatggtgcagctgctg
gcagggcgctggcggccgaccggggcggcgcggggcacgcggggagggttgcctgaacta
tcctctgctgccaaacatgaagacagcttgtttagggatttatttgaagactacgaaagg
tgggttcgccctgtggaacacctgagcgacaagataaaaatcaagtttggccttgcgata
tctcagttagtggacgtggatgagaaaaaccagctgatgacgacgaacgtctggttgaag
caggaatggatagatgtgaaattgagatggaatcctgacgattatggtgggataaagatt
atacgtgttccttcggactccctgtggatcccagacatcgttttgttcgataatgcagat
ggacgttttgaaggggccagcacgaaaacagttgtcaggtacaacggcactgtcacgtgg
acgcaaccagcaaactacaaaagttcttgcaccatcgacgttacctttttcccgtttgat
ctccaaaattgttccatgaaattcggctcgtggacatacgatggatcccaggttgatata
atcctagaggaccaagatgtcgacagaacagactttttcgacaatggagagtgggaaatc
atgagcgcgatggggagcaaggggaaccggacggacagctgctgctggtacccctacatc
acgtactcctttgtgattaagcggctgcctctcttctataccttgtttcttattatcccc
tgcattgggctctcatttctgactgtggttgtcttctatctcccttcaaacgagggtgaa
aagattagcctctgcacctcagtgctcgtctctctgactgtcttccttttggtaatcgaa
gagatcataccgtcatcttccaaagtcatacccctgattggggagtacttggtgttcacc
atgattttcgtgaccctatccattatggtgactgtctttgccatcaacatccaccaccgc
tcttcctccacacacaacgctatggcgccctgggttcgtaagatatttctccacaagctt
cccaagctgctctgcatgagaagtcatgcggataggtacttcactcagagagaagaagcc
gagagtggggctggacctaaatctcggaacactttggaagccgcactcgattgcattcgc
tacatcacgaggcacgtcgtgaaagagaacgacgtccgcgaggttgttgaagattggaaa
ttcatagcccaagtccttgatcggatgtttttgtggacgtttcttctggtgtcaatcatt
gggactttagggctttttgttcctgttatttataaatgggccaatataatagtcccagtt
cacattggaaacacaattaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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