KEGG   Rattus norvegicus (rat): 25248Help
Entry
25248             CDS       T01003                                 

Gene name
Cnr1, SKR6R
Definition
(RefSeq) cannabinoid receptor 1
  KO
K04277  cannabinoid receptor 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04015  Rap1 signaling pathway
rno04080  Neuroactive ligand-receptor interaction
rno04714  Thermogenesis
rno04723  Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    25248 (Cnr1)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    25248 (Cnr1)
 09150 Organismal Systems
  09156 Nervous system
   04723 Retrograde endocannabinoid signaling
    25248 (Cnr1)
  09159 Environmental adaptation
   04714 Thermogenesis
    25248 (Cnr1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:rno04030]
    25248 (Cnr1)
G protein-coupled receptors [BR:rno04030]
 Rhodopsin family
  Others
   Cannabinoid
    25248 (Cnr1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx 7tm_4 7TM_GPCR_Srx YlaC
Motif
Other DBs
NCBI-GeneID: 25248
NCBI-ProteinID: NP_036916
RGD: 2369
Ensembl: ENSRNOG00000008223
UniProt: P20272
Position
5q21
AA seq 473 aa AA seqDB search
MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
KMTAGDNSPLVPAGDTTNITEFYNKSLSSFKENEENIQCGENFMDMECFMILNPSQQLAI
AVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFVDFHV
FHRKDSPNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCL
MWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIGVTSVLLLFIVYAYMYILW
KAHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPL
LAIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTA
QPLDNSMGDSDCLHKHANNTASMHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
NT seq 1422 nt NT seq  +upstreamnt  +downstreamnt
atgaagtcgatcctagatggccttgcagacaccaccttccgtaccatcaccacagacctc
ctctacgtgggctcgaatgacattcagtatgaagatatcaaaggagacatggcatccaaa
ttaggatacttcccacagaaattccctctaacttccttcaggggtagtcccttccaagaa
aagatgaccgcaggagacaactccccgttggtcccagcaggagacacaacaaacattaca
gagttctataacaagtctctctcgtcgttcaaggagaatgaggagaacatccagtgtggg
gagaactttatggacatggagtgctttatgattctgaatcccagccagcagctggccatc
gctgtactgtccctcacactgggcaccttcacggttctggagaacctactggtgctgtgt
gtcatcctgcactcccgcagtctccgatgcaggccttcctaccacttcatcggcagcctg
gcagtggccgacctcctgggaagtgtcatttttgtgtacagctttgttgacttccatgta
ttccaccgtaaagacagccccaatgtgtttctgttcaaactgggtggggttacagcctcc
ttcacagcttctgtgggcagcctgttcctcacagccatcgacaggtacatatccattcac
aggcctctggcctataagaggatcgtcaccaggcccaaggccgttgtggccttttgcctg
atgtggactatcgcaatagtaatcgctgtgttgcctctcctgggctggaactgcaagaag
ctgcaatctgtttgctcggacattttcccactcattgacgagacctacctgatgttctgg
attggggtgaccagtgtgctgctgctgttcattgtgtacgcgtacatgtacattctctgg
aaggctcacagccacgcggtccgcatgattcagcgtgggacccagaagagcatcatcatc
cacacgtcagaagacggcaaggtgcaggtgacccggcctgaccaagcccgcatggacatt
aggctggccaaaaccctggttctgatcctggtggtgttgatcatctgctggggccctctg
cttgcgatcatggtgtatgacgtcttcgggaagatgaacaagcttatcaagacggtgttt
gccttctgcagtatgctctgcctgctgaactccaccgtgaaccccatcatctatgctctg
aggagcaaggacctgagacatgctttccgaagcatgttcccttcgtgcgaaggcaccgca
cagcctctagacaacagcatgggggactcagactgcctgcacaagcacgccaacaacaca
gccagcatgcacagggccgcggagagctgcatcaagagcaccgttaagatcgcgaaggtg
accatgtctgtgtccacagacacgtccgccgaggctctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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