KEGG   Rattus norvegicus (rat): 25558
Entry
25558             CDS       T01003                                 
Symbol
Stxbp1
Name
(RefSeq) syntaxin-binding protein 1
  KO
K15292  syntaxin-binding protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04721  Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09156 Nervous system
   04721 Synaptic vesicle cycle
    25558 (Stxbp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    25558 (Stxbp1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    25558 (Stxbp1)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    25558 (Stxbp1)
 SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    25558 (Stxbp1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   25558 (Stxbp1)
SSDB
Motif
Pfam: Sec1 SGT1 YlbD_coat FRB_dom
Other DBs
NCBI-GeneID: 25558
NCBI-ProteinID: NP_037170
RGD: 3785
Ensembl: ENSRNOG00000015420
UniProt: P61765 A6JU89
Structure
Position
3:complement(16076725..16138431)
AA seq 594 aa
MAPIGLKAVVGEKIMHDVIKKVKKKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVED
INKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK
SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPHKAQMKNPILERLAEQIATLC
ATLKEYPAVRYRGEYKDNALLAQLIQDKLDAYKADDPTMGEGPDKARSQLLILDRGFDPS
SPVLHELTFQAMSYDLLPIENDVYKYETSGIGEARVKEVLLDEDDDLWIALRHKHIAEVS
QEVTRSLKDFSSSKRMNTGEKTTMRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQG
TVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVSTYDKIRIILLYIFLKNGITE
ENLNKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKERISEQTYQLSRWTP
IIKDIMEDTIEDKLDTKHYPYISTRSSASFSTTAVSARYGHWHKNKAPGEYRSGPRLIIF
ILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLNKTDEEISS
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggcccccattggcctcaaggcggtggtcggagagaagatcatgcatgatgttatcaag
aaggtgaagaagaagggcgagtggaaggtgctggtggtggaccagttaagcatgaggatg
ctgtcttcctgctgcaagatgacagacatcatgaccgaggggatcacaattgtggaggat
atcaacaagcgccgagagccgctccccagcctagaggccgtgtacctcatcaccccgtct
gagaagtctgtccactctctcatcagtgattttaaggacccgccgactgctaaatatcgg
gccgcacatgtgttcttcacagactcatgtccagatgccctgtttaacgagctggtaaaa
tctcgagcagccaaagtcatcaagacgctgacggaaatcaacattgcgtttctcccctat
gagtcccaggtgtattccctggactccgctgactctttccaaagtttctacagccctcac
aaggcacagatgaagaatcccatactggaacgcctggcagagcaaatcgccaccctgtgt
gccaccctgaaggagtacccggctgtgcggtatcggggggagtacaaggacaatgccttg
ctggctcagctgatccaggacaagctggacgcttataaagctgatgacccgacaatgggg
gagggtcccgacaaggcacggtcccagctcctgatcctggatcgtggctttgaccccagc
tcccctgtgcttcatgaactgacgtttcaggctatgagttacgacctgctgcctattgaa
aatgatgtttacaagtatgagaccagcggcattggagaggcgagggtgaaggaggtgctc
ctggatgaggacgatgacctgtggattgcactgcgacacaagcacatcgcagaggtgtcc
caggaagtgacccggtctctgaaggacttttcctctagcaagaggatgaatactggagag
aagaccaccatgcgggacctgtcccagatgctgaagaaaatgccccagtaccagaaggag
ctcagcaagtattcgactcacctgcaccttgctgaagactgtatgaagcattaccaaggc
accgtagacaaactctgccgcgtggagcaggacctggcgatgggcacagatgctgagggg
gaaaaaatcaaggaccccatgagagccattgtccccatcctgctggatgcaaatgtcagc
acttatgacaaaattcgcatcatccttctctacatcttcctgaagaacggtatcactgaa
gaaaacctaaacaaactcatccagcacgcccagatccccccagaagacagtgagatcatc
accaacatggctcacctcggggtgcccatcgtcacggattccacactacgccgcagaagc
aagccggagcggaaggagcgcatcagtgagcagacctaccagctctcacgatggaccccg
atcattaaagacattatggaggacaccattgaagacaaactggatacaaagcactaccca
tacatctctacccgctcttccgcatccttcagcaccactgctgtgagtgcccgctatgga
cattggcacaagaataaggcccccggggagtaccgcagcggcccccgcctcattattttc
atccttgggggcgtgagcctgaatgagatgcgctgtgcctacgaagtgacgcaggccaac
ggcaagtgggaagtgctcataggatccacgcacattctcaccccacagaaactgctggac
acgctgaagaagctgaataaaacagacgaagaaataagcagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
3D Structure (8)   
   PDB (8)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system