KEGG   Rattus norvegicus (rat): 25615
Entry
25615             CDS       T01003                                 
Symbol
Sdc2
Name
(RefSeq) syndecan-2 precursor
  KO
K16336  syndecan 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04820  Cytoskeleton in muscle cells
rno05144  Malaria
rno05205  Proteoglycans in cancer
rno05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    25615 (Sdc2)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    25615 (Sdc2)
  09174 Infectious disease: parasitic
   05144 Malaria
    25615 (Sdc2)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    25615 (Sdc2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:rno04090]
    25615 (Sdc2)
   00535 Proteoglycans [BR:rno00535]
    25615 (Sdc2)
CD molecules [BR:rno04090]
 Proteins
  25615 (Sdc2)
Proteoglycans [BR:rno00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   25615 (Sdc2)
SSDB
Motif
Pfam: Syndecan Glycophorin_A DUF2721 Dsc3_C DUF4407 Cadherin_C_2 ATG22
Other DBs
NCBI-GeneID: 25615
NCBI-ProteinID: NP_037214
RGD: 3649
Ensembl: ENSRNOG00000004936
UniProt: P34900 A0A9K3Y7Q3 Q6IRK3
Position
7:66012405..66125101
AA seq 211 aa
MRVRATSPGNMQRAWILLTLGLMACVSAETRAELTSDKDMYLDSSSIEEASGLYPIDDDD
YSSASGSGAYEDKGSPDLTTSQLIPRISLTSAAPEVETMTLKTQSITPTQTESPEETDKK
EFEISEAEEKQDPAVKSTDVYTEKHSDNLFKRTEVLAAVIAGGVIGFLFAIFLILLLVYR
MRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
NT seq 636 nt   +upstreamnt  +downstreamnt
atgcgggtacgagccacgtccccggggaatatgcagcgtgcgtggatcctgctcaccttg
ggcttgatggcctgtgtgtcggcagagacgagagcagagctgacatctgataaggacatg
taccttgacagcagctccattgaggaagcttcaggattatatcctattgatgatgatgac
tattcttctgcctctggctcaggagcttatgaagacaaagggagtccagatctgacaaca
tcccaactgattccaaggatctccctcactagtgctgctcccgaagtggaaaccatgacg
ttgaagacacaaagcatcacacccactcagaccgagtcacccgaagaaactgacaagaag
gagtttgaaatctctgaggcagaagaaaagcaggaccctgctgtaaaaagcacagacgtg
tacaccgagaaacattcagacaatctgttcaagcggacggaagttctagcagctgtcatt
gctggcggtgtgattggctttctctttgccattttcctcatcctgttgttggtgtaccgc
atgcggaagaaagacgaaggaagctacgaccttggagaacgcaaaccgtccagcgcagct
taccagaaggcacccactaaggagttttatgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (7)   
   Pfam (7)   
All databases (40)   

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