KEGG   Rattus norvegicus (rat): 25664Help
Entry
25664             CDS       T01003                                 

Gene name
Pparg
Definition
(RefSeq) peroxisome proliferator-activated receptor gamma
  KO
K08530  peroxisome proliferator-activated receptor gamma
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03320  PPAR signaling pathway
rno04152  AMPK signaling pathway
rno04211  Longevity regulating pathway
rno04380  Osteoclast differentiation
rno04714  Thermogenesis
rno05016  Huntington disease
rno05200  Pathways in cancer
rno05202  Transcriptional misregulation in cancer
rno05216  Thyroid cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04152 AMPK signaling pathway
    25664 (Pparg)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    25664 (Pparg)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    25664 (Pparg)
  09149 Aging
   04211 Longevity regulating pathway
    25664 (Pparg)
  09159 Environmental adaptation
   04714 Thermogenesis
    25664 (Pparg)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    25664 (Pparg)
   05202 Transcriptional misregulation in cancer
    25664 (Pparg)
  09162 Cancer: specific types
   05216 Thyroid cancer
    25664 (Pparg)
  09164 Neurodegenerative disease
   05016 Huntington disease
    25664 (Pparg)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    25664 (Pparg)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:rno03310]
    25664 (Pparg)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone-like
    25664 (Pparg)
Nuclear receptors [BR:rno03310]
 1. Thyroid hormone like
  1C. Peroxisome proliferator-activated receptor (PPAR)
   25664 (Pparg)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: PPARgamma_N zf-C4 Hormone_recep Tmemb_55A
Motif
Other DBs
NCBI-GeneID: 25664
NCBI-ProteinID: NP_037256
RGD: 3371
Ensembl: ENSRNOG00000008839
UniProt: O88275
Position
4q42
AA seq 505 aa AA seqDB search
MGETLGDPPVDPEHGAFADALPMSTSQEITMVDTEMPFWPTNFGISSVDLSVMDDHSHSF
DIKPFTTVDFSSISAPHYEDIPFTRADPMVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
QLYNRPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
QSKEVAIRIFQGCQFRSVEAVQEITEYAKNIPGFINLDLNDQVTLLKYGVHEIIYTMLAS
LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKVLQKMTDLRQIVTEHVQL
LHVIKKTETDMSLHPLLQEIYKDLY
NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt
atgggtgaaactctgggagatcctcctgttgacccagagcatggtgccttcgctgatgca
ctgcctatgagcacttcacaagaaattaccatggttgacacagagatgccattctggccc
accaacttcggaatcagctctgtggacctctctgtgatggatgaccactcccattccttt
gacatcaaaccctttaccacggttgatttctccagcatttctgctccacactatgaagac
atcccgttcacaagagctgacccaatggttgctgattacaaatatgacctgaagctccaa
gaataccaaagtgcgatcaaagtagagcctgcgtccccgccttattattctgaaaaaacc
caactctacaacaggccacatgaagagccttcaaactccctcatggccatcgagtgccga
gtctgtggggataaagcatcaggcttccactatggagtccatgcttgtgaaggatgcaag
ggttttttccgaagaaccatccgattgaagcttatttatgataggtgtgatcttaactgt
cggatccacaaaaagagtagaaataaatgtcagtactgtcggtttcagaagtgccttgct
gtggggatgtctcacaatgccatcaggtttgggcgaatgccacaggccgagaaggagaag
ctgttggcggagatctccagtgatatcgaccagctgaacccagagtctgctgatctgcga
gccctggcaaagcatttgtatgactcatacataaagtccttcccgctgaccaaagccaag
gcgagggcgatcttgacaggaaagacaacagacaaatcaccatttgtcatctacgacatg
aattccttaatgatgggagaagacaaaatcaagttcaaacatatcacccccctgcaggag
cagagcaaagaggtggccatccgcatttttcaagggtgccagtttcgatccgtggaagct
gtgcaagagatcacagagtatgccaaaaatatccctggtttcattaaccttgacttgaat
gaccaagtgactctgctcaagtatggtgtccatgagatcatctacaccatgctggcctcc
ctgatgaataaagatggagtcctcatatcagagggacaaggattcatgaccagggagttc
ctcaaaagcctgcggaagccctttggtgactttatggagcctaagtttgagtttgctgtg
aagttcaatgcactggaattagatgacagtgacttggccatatttatagctgtcattatt
ctcagtggagaccgcccaggcttgctgaacgtgaagcccatcgaggacatccaagacaac
ctgctgcaggccctggaactccagctgaagctgaaccacccggagtcctcccagctgttc
gccaaggtgctccagaagatgacagacctcaggcagattgtcacagagcacgtgcagcta
ctgcatgtgatcaagaagacggagacagatatgagccttcaccctctgctccaggagatc
tacaaggacttgtattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (18)   
   RefSeq(nuc) (4)   
   GenBank (7)   
   EMBL (7)   
Protein domain (4)   
   Pfam (4)   
All databases (47)   

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