KEGG   Rattus norvegicus (rat): 287727
Entry
287727            CDS       T01003                                 
Symbol
Dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    287727 (Dhx8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    287727 (Dhx8)
Spliceosome [BR:rno03041]
 Complex C
  Other components
   Step II factors
    287727 (Dhx8)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 AAA_19 nSTAND3 Flavi_DEAD AAA_16 T2SSE TsaE PhoH Sigma54_activ_2 ABC_tran
Other DBs
NCBI-GeneID: 287727
NCBI-ProteinID: NP_001400156
RGD: 1310723
Ensembl: ENSRNOG00000020772
Position
10:87167861..87204426
AA seq 1242 aa
MAVAVATAGVLMGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEEDVKVAVDVLKELEALMPSAAGQEKQRDTEHRDRTKKKKRSRSR
DRDRDRDRDRDRDRDRDRDKDRERDRDRERDRERDRDRDHKRRHRSRSRSHSRTRERAKG
KSRYRSRSRSQSPFKDRKDREKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQF
GCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDV
DQETGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE
KWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMD
MSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEG
RQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAV
HDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCL
GQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLF
GLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLD
ASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPS
EMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTP
ISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIN
DLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVH
LGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFS
NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK
DPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAP
AFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq 3729 nt   +upstreamnt  +downstreamnt
atggctgtggccgtggccaccgccggggtcctaatgggctcggaacctggcccggcggaa
gagctcgctaaactcgagtacctgtctttggtgtcaaaggtttgcacggagctggacaat
catttgggcatcaacgacaaggatctggctgaatttgtcatcagtcttgctgagaaaaat
actacctttgatacttttaaggcttctctggtcaaaaatggtgcagaattcacagattct
cttattagcaacctgttgcgtctcatacaaactatgcggcctccagcaaagccttctact
agtaaagatcccgttgttaaacccaaaactgaaaaagaaaagctgaaggaactcttccct
gtcctttgccagccagacaacccttcagttcggaccatgttggatgaagaagatgtgaaa
gttgctgtggatgttttgaaagagctggaagctttaatgcccagtgcagcaggccaagag
aaacaaagagacactgagcacagggacaggacaaagaagaagaagaggagtcggagccga
gatcgtgatcgtgatcgagaccgggacagggaccgagaccgggacagggaccgtgacaag
gaccgagaacgagatagagatcgagaacgagacagagagcgagatagagatagagaccat
aagcggagacaccgatcacgctctcggtcacattctaggacccgggagagggctaagggg
aaatctagatacaggtctaggagcagaagtcagagtcccttcaaagatcggaaagaccgg
gaaaagtatggggagaggaatctggacagatggcgggataagcatgtggaccgccctcct
cctgaagagcctgccattggagacatttacaatggcaaagtgaccagcatcatgcagttt
ggctgcttcgtgcagctggaaggcctaaggaagcggtgggaaggcctggtgcacatttct
gagcttcgacgggaaggtcgagtggccaatgtggctgatgttgtgagcaaaggccagagg
gttaaggtcaaagttctgtccttcactgggaccaagaccagcctgagcatgaaggatgtg
gatcaagaaacaggagaagatctaaacccaaacagacgcagaaatctggttggggagacc
aacgaagagacgtcgatgcggaacccagaccgacccacccacctctccctcgtcagtgct
cctgaagtagaggacgactcactggagcgcaagcggctcacccgcatctctgacccagag
aagtgggagatcaaacagatgattgctgccaatgtgctttccaaagaagagtttccagac
ttcgatgaagagaccggcattctccctaaggtggatgatgaagaagatgaggatcttgaa
attgaacttgttgaagaggagcctccgttcctgagagggcacaccaagcagagcatggac
atgagccccatcaaaatcgttaagaacccggatggctccctctcccaagcagccatgatg
cagagtgccctggccaaagaaaggcgggagctgaagcaggcccagcgggaagcagagatg
gattctatacccatggggctcaacaaacactgggtggaccccttgcctgatgcggaaggc
aggcagatcgctgccaacatgagggggattgggatgatgcccaatgacattcctgagtgg
aagaagcatgcctttgggggcaacaaagcttcttacgggaagaagacccagatgtcaatc
cttgagcagagagagagcctgcctatctacaaactgaaggaacagctggtgcaggctgta
catgacaatcagatcctaattgtaatcggagagacaggatctgggaagacaacacagatc
acccagtacctggcagaggcaggctatacttccaggggcaagattgggtgcacccagccc
agaagagtggcagctatgtctgtggccaaaagagtatcagaggaatttggttgttgcctt
ggtcaagaggtaggctacaccattcgatttgaggattgcaccagcccagaaacagtcatc
aagtacatgacagacggcatgctgctcagagagtgcctgattgatcccgatctcactcag
tacgccatcatcatgctggacgaggcacatgagaggactattcacacagatgtgctcttt
gggttgttgaaaaagacagttcaaaaacgacaagacatgaagctgattgtcacctcagcc
accctggatgcagtgaagttttctcagtacttctatgaagcacccatcttcacaatccct
ggtcgaacctatccagtggagattctgtacacaaaggagcccgaaacagactacttggac
gccagcctgatcacagtcatgcagatccacctgacagagccgccaggtgacatcttggtt
tttttgactggtcaggaagagatcgatactgcttgtgagatcctgtatgaaagaatgaag
tcactgggacctgacgtcccagagttgatcatcctcccagtgtactctgctcttccgagt
gagatgcagacccgaatctttgatccagctcctcctggcagcagaaaggtggtgattgcc
accaacattgcagaaacatctctgaccatcgacggcatctactatgtggtcgaccctgga
tttgtgaagcaaaaagtttacaattctaaaacagggattgaccagctcgtggtgacacct
atttctcaggctcaagcaaagcagagagctggcagagctgggagaaccggcccaggcaag
tgttacaggctgtacacagagcgtgcctaccgggatgaaatgctgaccaccaatgtgcca
gaaatccagagaaccaacctggccagcacagtgctgtccctcaaggccatgggcattaat
gacctgctgtcctttgacttcatggatgcgccaccgatggaaactctgatcacagccatg
gagcaactgtatacgctgggggccctggacgatgagggcctgctcactcgccttggccgc
aggatggcagagttccctctggagccaatgctctgcaaaatgctcatcatgtctgtgcat
ctgggctgcagcgaagagatgctaactattgtgtccatgctgtctgtgcagaacgtcttc
taccgacccaaggacaagcaggcccttgcagatcagaagaaggccaaattccaccagaca
gaaggggaccatctcaccctgctggccgtgtacaattcctggaagaacaacaaattctcc
aacccatggtgctatgagaacttcatccaggctcgttccttacgccgggcccaggacatt
cgaaagcagatgttaggcataatggacaggcacaagctggatgtggtctcctgtggtaaa
tccacagtgcgagtgcagaaggccatctgcagtggcttcttccggaatgctgccaagaag
gacccccaggagggctaccggacattgattgaccagcaggtggtctatatccatccttcc
agtgctcttttcaacagacagcccgaatgggtggtataccatgaactggtgctgaccaca
aaggagtacatgcgtgaggtcaccaccatcgacccccggtggcttgtggagtttgctccg
gctttcttcaaagtctctgacccaaccaagctaagcaagcagaagaagcagcagcgcctg
gagcctctgtacaatcggtatgaggaaccgaacgcctggagaatctcccgtgctttccgg
cggcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (35)   

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