KEGG   Rattus norvegicus (rat): 289323
Entry
289323            CDS       T01003                                 
Symbol
Nvl
Name
(RefSeq) nuclear valosin-containing protein-like
  KO
K14571  ribosome biogenesis ATPase
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    289323 (Nvl)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    289323 (Nvl)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    289323 (Nvl)
SSDB
Motif
Pfam: AAA Nucleolin_bd AAA_lid_3 RuvB_N AAA_16 AAA_5 AAA_22 AAA_14 TIP49 AAA_33 AAA_2 nSTAND3 RNA_helicase AAA_28 Mg_chelatase Zeta_toxin AAA_18 NACHT IstB_IS21 ABC_tran ATPase AAA_25 AAA_3 AAA_17 Rad17 TsaE Viral_helicase1 NB-ARC Parvo_NS1 DUF815 Vps4_C Sigma54_activ_2
Other DBs
NCBI-GeneID: 289323
NCBI-ProteinID: NP_001099450
RGD: 1311270
Ensembl: ENSRNOG00000003629
UniProt: D3ZTY9 A6JGJ3
Position
13:complement(95385389..95438490)
AA seq 855 aa
MKPRPAVFVDRKLKQRVIQYLSSNRCGKYVDTGILASDLQRMYSVDYGRRKRNAFRIQVE
KVFNIISSEKEHKNLKELEDGHLAKRARQDEDDEYTESYSDDDSNMEDYPDPQSANHMNS
SLLSLYRKGNSDSVSTTPKLEQREDATSSPLLSSKTDSMPLKTPAREPEGGWFIDKTPGG
QKESLPLDLSDDQSNCKKQDPGIQNLKDSSLLESDKKRKSRAKGKGNKRKTEGLQEADGE
IEAILQKRAKAKSTELQISSVKFEDVGGNDATLKEVCKMLIHMRHPEVYQHLGVVPPRGV
LLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIV
FIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALR
RAGRFDREVCLGIPDEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREA
AVCAVHRVLMRRQEQQRTEPETGGLPSDGEQGRSLGAEPPSETQDELQRLLGLLRDQDPI
SEEQMQGLCLELNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPV
RNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESER
AVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFIL
AATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVDLEAIAN
DHRCDCYTGADLSALVREASLCALRQEITGQKNGIGTAELTVSHKHFEEAFRKVKPSISV
KDQRMYEALQRSLSQ
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgaagcccagacccgcggttttcgtagacaggaaactgaagcaacgagtcattcagtac
ctcagtagtaatagatgtggcaaatatgtggacactggaatcttagcatccgacttgcaa
agaatgtacagtgtagattatggtcgaagaaaaagaaatgcttttagaatccaggtggaa
aaagtgtttaacataattagtagtgagaaagaacataagaatcttaaagaactagaagat
ggacatctggcaaaaagagcaagacaagatgaagatgatgagtacactgaaagctattct
gatgatgattcaaacatggaagattacccagatccacagtcagcaaatcacatgaacagt
tccctgctctctttgtatcggaaaggaaactctgattctgtttcaaccactccaaagttg
gaacagagagaagacgccacttcatcaccattgctgtcttctaaaacagactccatgcca
ttgaagacccctgcccgagaacctgagggaggatggtttattgacaaaaccccaggtgga
cagaaagaaagtcttcccttggacctgtcagatgaccaaagcaactgtaaaaagcaggat
cctgggattcagaatttaaaagattcttctcttctggaaagtgacaagaaaaggaaaagt
agggcaaaaggcaaaggaaacaaaagaaagacagagggtcttcaagaagcggatggagag
atagaagctattctgcaaaagagagctaaagcgaagagtacagagttgcagatttccagt
gtgaagtttgaagatgtcggaggcaatgatgcgacattaaaagaagtctgcaagatgctg
attcacatgcgtcatccagaggtgtaccagcaccttggtgtcgtgccccctcgtggagtt
cttctgcatggaccaccaggctgtgggaagacattacttgcacatgcgatagcaggggag
cttgacttgccgattctgaaagtggctgccccagagatcgtgtcgggagtgtctggagag
tctgagcaaaagctcagggatttatttgaccaggccgtgtcaaacgcaccatgtattgtg
ttcattgatgaaattgatgcaatcacccccaaaagagaagttgcttcaaaagatatggaa
cgaaggatcgtggcccagcttctaacctgcatggacgatctgaataacgtggcagctaca
gcccgagtcctagttgttggagctactaaccggccagactcattggatcctgctctgaga
cgtgcgggaaggtttgatcgagaagtctgcttgggtatcccagatgaggcatccagagaa
agaattctccaaactttgtgccgaaaactgagacttccagaaacctttaatttttctcat
ttagcacacctgacaccaggctttgttggtgctgacctgatggctctttgtcgagaggca
gccgtgtgtgcggtgcacagggtcttgatgagacggcaggagcagcagaggacagagcct
gagactgggggtttgccctctgacggagagcaggggagaagcctgggagcagagccccct
tctgaaacacaggatgaattgcaaaggctgttggggttgctaagagaccaagatcccatc
tcagaggagcagatgcaaggactgtgccttgaattaaatgatttcattgttgctctatca
gaagtccagccttctgccaaaagggaaggctttgtaactgtccctaatgtgacatgggct
gatgtcggtgccctggaagatatcagagaggagctcaccatggcaatattggcacctgtt
cgaaacccagagcagttcagggctcttggtttggtggccccagctggtgtcctcctagcc
ggacctcctgggtgtgggaaaacgctgctggcaaaggctgtggcaaatgagtctggacta
aattttatatctgtcaaaggccctgaattattaaatatgtatgtcggggagagtgagcgc
gctgtgcgacaggtttttcagcgagccaagaactcggcgccctgcgtgatattctttgat
gaggtggatgccttatgcccccggagatcagaccgagaaacaggtgctagtgtccgtgtg
gtgaatcagctgctgacagaaatggatggtttagaaacacgccagcaagtttttattttg
gctgccactaatagaccagatatcattgaccctgctattctgcgccccggccggctggac
aaaacactctttgtgggtttgccacccccagcagaccgtgttgccatattaaagactatt
acaaaaaatggcaccaaacctcccctggatgaagatgtagatttggaagcaattgctaat
gaccatcgttgtgattgctatacgggtgcagacctttctgctttggtccgagaagcttct
ctctgtgccctgagacaagaaataacaggacagaagaatggcattggaacagctgagctg
acggtcagtcataagcactttgaagaagctttcaggaaagtgaaaccatccatatcagta
aaggatcaaaggatgtacgaagctctacagaggtccctcagtcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (2)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (32)   
   Pfam (32)   
All databases (60)   

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