KEGG   Rattus norvegicus (rat): 291211
Entry
291211            CDS       T01003                                 

Gene name
Ggps1, Crlf3, rGGPS1a, rGGPS1a1, rGGPS1a2, rGGPS1a3
Definition
(RefSeq) geranylgeranyl diphosphate synthase 1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00900  Terpenoid backbone biosynthesis
rno01100  Metabolic pathways
Module
rno_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    291211 (Ggps1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rno01006]
    291211 (Ggps1)
Enzymes [BR:rno01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     291211 (Ggps1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     291211 (Ggps1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     291211 (Ggps1)
Prenyltransferases [BR:rno01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   291211 (Ggps1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 291211
NCBI-ProteinID: NP_001007627
RGD: 1359680
Ensembl: ENSRNOG00000016767
UniProt: Q6F596
Position
17q12.1
AA seq 300 aa
MEKTKEKAERILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLL
ELHQGQGLDIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVQYLEDVGSFEYTRYTLRELEAKAYKQIEACGGNPSLVALVKHLSKMFTEENE
NT seq 903 nt   +upstreamnt  +downstreamnt
atggagaaaactaaagagaaagctgaaagaattcttctagagccttataagtacttactt
caattaccaggtaaacaggtgagaaccaaactttcacaggcatttaatcactggctgaaa
gttccagaagacaagctacagattatcattgaagtgactgaaatgttgcataatgccagt
ttactcattgatgatattgaagacagttcaaagctccgacgtggttttccagttgctcac
agcatctatggtgtcccatctgtcattaactctgccaattatgtctacttccttggcctg
gaaaaagtcttaacacttgatcacccagatgcagtgaagcttttcacacgacagcttttg
gaacttcatcagggacaaggcctagatatttactggagagatacctacacttgtccgact
gaagaagaatataaagccatggtgttgcagaagacaggtggcttgtttggattagccgta
ggcctcatgcagttgttctctgactacaaagaagatctaaagccactgctggacacactt
gggctcttcttccagattagagatgattacgccaatctacactccaaagaatacagtgaa
aacaaaagtttctgtgaagacctgacagaaggaaagttctcatttcctactattcatgcc
atttggtcaaggccagaaagcacccaggtacagaacatcctgcgccaaagaacagaaaat
atagacattaaaaagtactgtgtgcagtacctggaggatgtaggttcttttgaatatacg
cgatacactcttagagagctcgaagctaaagcctacaaacaaatcgaggcctgcggtggg
aacccttcactagtggctttagtcaagcatttaagtaagatgttcacagaagaaaatgaa
taa

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