KEGG   Rattus norvegicus (rat): 291287
Entry
291287            CDS       T01003                                 

Gene name
Tubal3
Definition
(RefSeq) tubulin alpha chain-like 3
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    291287 (Tubal3)
  09143 Cell growth and death
   04210 Apoptosis
    291287 (Tubal3)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    291287 (Tubal3)
   04540 Gap junction
    291287 (Tubal3)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    291287 (Tubal3)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    291287 (Tubal3)
   05012 Parkinson disease
    291287 (Tubal3)
   05014 Amyotrophic lateral sclerosis
    291287 (Tubal3)
   05016 Huntington disease
    291287 (Tubal3)
   05020 Prion disease
    291287 (Tubal3)
   05022 Pathways of neurodegeneration - multiple diseases
    291287 (Tubal3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    291287 (Tubal3)
   03036 Chromosome and associated proteins [BR:rno03036]
    291287 (Tubal3)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    291287 (Tubal3)
   04147 Exosome [BR:rno04147]
    291287 (Tubal3)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     291287 (Tubal3)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     291287 (Tubal3)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    291287 (Tubal3)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   291287 (Tubal3)
  Exosomal proteins of other body fluids (saliva and urine)
   291287 (Tubal3)
  Exosomal proteins of colorectal cancer cells
   291287 (Tubal3)
SSDB
Motif
Pfam: Tubulin_C Tubulin
Other DBs
NCBI-GeneID: 291287
NCBI-ProteinID: NP_001099588
RGD: 1305289
Ensembl: ENSRNOG00000028750
UniProt: F1LUM5
Position
17
AA seq 382 aa
MDHRTVSLDTFFHETSTGKHVPRTLFMDLEPTVIDGVRVGKYHSLFHPEQLVNGKEDAAN
NYARGRYSAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKTKLEFSVYPSPRI
STAVVEPYNAILTTHSTIEYSDCTFMVDNEAVYNICHRKLGVEHPSYSSINRLIAQVLSS
ITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITTLAPIISAEKAYQEHLSVPDITASCFE
LSNQLVKCDPRLGKYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINC
QPPTVVPGGDLARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGE
FEEAREDLAALEKDYEEVGLSF
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggatcacaggactgtatctttagataccttctttcatgagacaagcactgggaagcat
gtgcccagaacacttttcatggacctagaaccaaccgttatagatggcgtccgtgtgggg
aagtaccattcactcttccacccagaacaacttgtgaatggaaaggaggatgctgcaaac
aactatgcacgaggtcgctactctgcagagcaatgcagtggacttcagggatttctgatt
taccgaagctttggaggaggcacggggtcaggatttacatctctcttgatggagcgactc
tctgtagagtattgcaagaagacaaaattggagttctctgtctatccatctcctcgaatc
tccactgcggtggtagaaccgtacaatgccatcctcaccactcactccaccatagaatac
tcagactgtaccttcatggtggacaatgaggctgtgtacaacatctgccatcgcaaactt
ggcgtcgagcatccttcctattcgagtatcaacaggctgattgctcaggtgctgtcttcc
attactgcttccctgcgatttgaaggacctttgaatgtggacttaattgaattccagacc
aacctagtaccttatccacgaatacatttccccatcaccacccttgcccccatcatctct
gctgaaaaggcgtaccaagagcacctctctgtgcctgacatcactgcttcttgctttgag
ctctccaaccagttggtcaagtgtgatccccggcttgggaagtacatggcttgctgctta
ctatacagaggagatgtggtccccaaggatgtcaatgaagcaattgcagccatgaagtcg
aggacctctgttcagtttgtagattggtgtccaactggtttcaaggtgggcatcaattgt
cagccacccacagtggtaccaggaggggatctagccagggttcagcgtgctgtgtgtatg
ttgagcaataccacagcgattgtggaagcctgggcccgcctagaccacaaatttgacctc
atgtacgccaagaaggcatttctgcactggtacatcacagaaggcatggagcttggggag
tttgaagaggccagggaagatctggctgctctggaaaaagattatgaagaagtgggtcta
agtttctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

Download RDF
KEGG   Rattus norvegicus (rat): 300218
Entry
300218            CDS       T01003                                 

Gene name
Tuba1c
Definition
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    300218 (Tuba1c)
  09143 Cell growth and death
   04210 Apoptosis
    300218 (Tuba1c)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    300218 (Tuba1c)
   04540 Gap junction
    300218 (Tuba1c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    300218 (Tuba1c)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    300218 (Tuba1c)
   05012 Parkinson disease
    300218 (Tuba1c)
   05014 Amyotrophic lateral sclerosis
    300218 (Tuba1c)
   05016 Huntington disease
    300218 (Tuba1c)
   05020 Prion disease
    300218 (Tuba1c)
   05022 Pathways of neurodegeneration - multiple diseases
    300218 (Tuba1c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    300218 (Tuba1c)
   03036 Chromosome and associated proteins [BR:rno03036]
    300218 (Tuba1c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    300218 (Tuba1c)
   04147 Exosome [BR:rno04147]
    300218 (Tuba1c)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     300218 (Tuba1c)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     300218 (Tuba1c)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    300218 (Tuba1c)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   300218 (Tuba1c)
  Exosomal proteins of other body fluids (saliva and urine)
   300218 (Tuba1c)
  Exosomal proteins of colorectal cancer cells
   300218 (Tuba1c)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 300218
NCBI-ProteinID: NP_001011995
RGD: 1307226
Ensembl: ENSRNOG00000021438
UniProt: Q6AYZ1
Position
7
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLARVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSAEGDDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgttggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacatggcatccagcctgatggccagatgccaagtgacaag
accattgggggaggagatgactccttcaacaccttcttcagtgagacaggagctggcaag
cacgtgccccgggcggtgttcgtagacctggaacccacagttattgatgaagttcgaact
ggcacctaccgccagctcttccacccagagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgtggccactacaccattggcaaggagatcattgaccttgtcttggac
agaattcgcaagctggctgaccagtgcacgggtctccagggcttcttggttttccacagc
tttggtgggggaactggctctgggttcacctccctgctgatggagaggctctctgtcgac
tacggaaagaagtccaagctggagttctccatttacccagccccccaggtttccactgct
gtggttgagccctacaattccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgacattgag
cgcccaacctacactaaccttaaccgccttattagccagattgtgtcttccatcactgct
tccctcagatttgatggggccctgaatgttgatctgacagaattccagaccaacctggtg
ccctaccctcgaatccacttccctctggccacttatgcccctgtcatctctgctgagaaa
gcctaccatgagcaacttacagtagcagagatcaccaatgcctgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcttgctgcctgctgtaccgt
ggtgatgtggtccccaaggatgtcaatgctgccattgccaccatcaagaccaagcgtacc
atccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagcctccc
actgtggtacctggtggcgacctggccagggtgcagagagctgtgtgtatgctgagcaac
accacagccattgctgaggcctgggctcgcctggatcacaagtttgatctgatgtatgcc
aagcgtgcctttgtgcactggtatgtgggtgagggcatggaggagggggagttctctgag
gcccgtgaggatatggctgccctagagaaggattatgaggaggttggggcagatagtgct
gaaggagacgatgagggtgaagaatattaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
Protein domain (3)   
   Pfam (3)   
All databases (56)   

Download RDF
KEGG   Rattus norvegicus (rat): 316531
Entry
316531            CDS       T01003                                 

Gene name
Tuba4a
Definition
(RefSeq) tubulin alpha-4A chain
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    316531 (Tuba4a)
  09143 Cell growth and death
   04210 Apoptosis
    316531 (Tuba4a)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    316531 (Tuba4a)
   04540 Gap junction
    316531 (Tuba4a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    316531 (Tuba4a)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    316531 (Tuba4a)
   05012 Parkinson disease
    316531 (Tuba4a)
   05014 Amyotrophic lateral sclerosis
    316531 (Tuba4a)
   05016 Huntington disease
    316531 (Tuba4a)
   05020 Prion disease
    316531 (Tuba4a)
   05022 Pathways of neurodegeneration - multiple diseases
    316531 (Tuba4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    316531 (Tuba4a)
   03036 Chromosome and associated proteins [BR:rno03036]
    316531 (Tuba4a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    316531 (Tuba4a)
   04147 Exosome [BR:rno04147]
    316531 (Tuba4a)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     316531 (Tuba4a)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     316531 (Tuba4a)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    316531 (Tuba4a)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   316531 (Tuba4a)
  Exosomal proteins of other body fluids (saliva and urine)
   316531 (Tuba4a)
  Exosomal proteins of colorectal cancer cells
   316531 (Tuba4a)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 316531
NCBI-ProteinID: NP_001007005
RGD: 1359623
Ensembl: ENSRNOG00000003597
UniProt: Q5XIF6
Position
9
AA seq 448 aa
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSYEDEDEGEE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatttcagtccatgtgggccaggcaggtgtccagatgggcaatgcctgc
tgggagctctactgcctggaacatgggattcagcctgatgggcagatgcctagcgataag
accattggtggaggggatgactccttcaccaccttcttctgtgaaactggagctggaaaa
catgtgcctcgggcagtctttgtggatctggagcctactgtaattgatgagatccgaaat
ggcccgtaccgccagctcttccacccagaacagcttatcactgggaaggaagatgcagcc
aacaactatgcccgtggtcactacaccattggcaaggagatcatcgacccagtgctggac
cggatccgcaagctgtctgatcagtgtacaggactccagggctttctggtgttccacagc
tttggaggaggcactggctctggcttcacctctctgctgatggaacggctttctgttgac
tatggcaagaagtccaagctggagttctccatctacccagccccacaagtgtccacggct
gtagtggagccctataactccatcctgaccacccataccaccctggaacactcggactgt
gccttcatggtggacaacgaggccatttatgacatctgtcgccgtaacctggatattgag
cgcccaacctataccaacctcaaccgcctcatcagccaaattgtctcctccatcacagct
tccttgcgctttgatggggccctcaatgtggacctgacagagttccagaccaacctggta
ccctaccctcgcatccacttccccttggctacctacgcaccagtcatttctgcagagaag
gcctaccatgagcagctgtcagtggcagagatcaccaatgcctgttttgagcctgccaac
cagatggtgaaatgtgaccctcggcatggcaagtacatggcctgctgcctgctgtaccgg
ggagatgtggtgcccaaggatgtgaacgctgccatcgctgccatcaagacgaagcgcagc
atccagtttgtggactggtgccccacaggcttcaaggtcggtatcaactaccagcctccc
accgtggtgcctgggggcgacctggccaaggtgcagcgtgcagtgtgcatgctgagcaac
acaaccgccattgctgaagcctgggcccgcctggaccacaagtttgacttgatgtatgcc
aagagggcttttgtacactggtatgtgggtgagggaatggaggagggggagttctccgag
gctcgagaggatatggctgccctggagaaagattatgaggaagtaggcatcgactcctat
gaggacgaggatgagggagaagaatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (69)   
   RefSeq(nuc) (3)   
   GenBank (33)   
   EMBL (33)   
Protein domain (3)   
   Pfam (3)   
All databases (100)   

Download RDF
KEGG   Rattus norvegicus (rat): 500319
Entry
500319            CDS       T01003                                 

Gene name
Tuba3a
Definition
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    500319 (Tuba3a)
  09143 Cell growth and death
   04210 Apoptosis
    500319 (Tuba3a)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    500319 (Tuba3a)
   04540 Gap junction
    500319 (Tuba3a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    500319 (Tuba3a)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    500319 (Tuba3a)
   05012 Parkinson disease
    500319 (Tuba3a)
   05014 Amyotrophic lateral sclerosis
    500319 (Tuba3a)
   05016 Huntington disease
    500319 (Tuba3a)
   05020 Prion disease
    500319 (Tuba3a)
   05022 Pathways of neurodegeneration - multiple diseases
    500319 (Tuba3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    500319 (Tuba3a)
   03036 Chromosome and associated proteins [BR:rno03036]
    500319 (Tuba3a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    500319 (Tuba3a)
   04147 Exosome [BR:rno04147]
    500319 (Tuba3a)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     500319 (Tuba3a)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     500319 (Tuba3a)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    500319 (Tuba3a)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   500319 (Tuba3a)
  Exosomal proteins of other body fluids (saliva and urine)
   500319 (Tuba3a)
  Exosomal proteins of colorectal cancer cells
   500319 (Tuba3a)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 500319
NCBI-ProteinID: NP_001035097
RGD: 1565719
Ensembl: ENSRNOG00000031707
UniProt: Q68FR8
Position
4
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgtggggcaggcaggtgtccagattggcaatgcctgc
tgggaactgtactgccttgaacatggtattcaacctgacggtcaaatgccaagcgacaaa
accattggcggtggggacgactcattcaacacgttcttcagtgagactggcgccggcaag
cacgtgcccagagcagtgtttgtggacctggagcccactgtggtcgatgaagtgcgcacg
ggaacctaccggcaactcttccacccagagcagctgatcactgggaaggaagatgcagcc
aataattatgccagaggtcactacaccattggcaaagagattgttgacctggtcctggac
agaatccgaaaactggctgatctgtgcacggggctgcagggcttcctcatcttccacagc
tttggagggggcacagggtctgggtttgcatctctgctgatggagcggctttccgtggac
tacggcaagaagtccaagctggagtttgccatctacccagccccccaggtctccacggct
gttgtggagccttacaactccatcctgaccacacacacgacactggagcactctgactgt
gctttcatggtggataatgaagccatctacgacatctgtcggcgaaacctggacattgaa
cgtcccacttacaccaacctcaatcgtctgattgggcagattgtgtcgtccatcacagcc
tctctgaggttcgacggggccctgaatgtggacttaacagaattccagaccaacctggtg
ccataccctcgaatccacttcccactggccacctatgccccggtcatctccgccgagaag
gcctaccatgagcagctgtcagtggcagagatcaccaacgcttgctttgagccagccaat
cagatggtcaagtgtgaccctcgccatggcaaatacatggcctgctgcatgttgtacagg
ggggatgtggttccaaaagatgtcaacgcggctattgctaccatcaaaaccaagcgtacc
atccagtttgtggattggtgtccaactggctttaaggtgggcattaactaccagcctccc
accgtggtccctgggggcgacctggccaaggtgcagcgggccgtgtgcatgctgagcaac
accactgccatcgcagaggcctgggcccgcctggaccacaaatttgacctcatgtacgcc
aagcgggccttcgtgcattggtacgtgggagagggcatggaggaaggggagttctcagag
gcccgggaggacctggccgcgctggagaaagattatgaagaggtgggcgtggattctgtg
gaagcagaggcagaagaaggggaggagtactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

Download RDF
KEGG   Rattus norvegicus (rat): 500363
Entry
500363            CDS       T01003                                 

Gene name
Tuba3b
Definition
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    500363 (Tuba3b)
  09143 Cell growth and death
   04210 Apoptosis
    500363 (Tuba3b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    500363 (Tuba3b)
   04540 Gap junction
    500363 (Tuba3b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    500363 (Tuba3b)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    500363 (Tuba3b)
   05012 Parkinson disease
    500363 (Tuba3b)
   05014 Amyotrophic lateral sclerosis
    500363 (Tuba3b)
   05016 Huntington disease
    500363 (Tuba3b)
   05020 Prion disease
    500363 (Tuba3b)
   05022 Pathways of neurodegeneration - multiple diseases
    500363 (Tuba3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    500363 (Tuba3b)
   03036 Chromosome and associated proteins [BR:rno03036]
    500363 (Tuba3b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    500363 (Tuba3b)
   04147 Exosome [BR:rno04147]
    500363 (Tuba3b)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     500363 (Tuba3b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     500363 (Tuba3b)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    500363 (Tuba3b)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   500363 (Tuba3b)
  Exosomal proteins of other body fluids (saliva and urine)
   500363 (Tuba3b)
  Exosomal proteins of colorectal cancer cells
   500363 (Tuba3b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 500363
NCBI-ProteinID: NP_001019507
RGD: 1565155
Ensembl: ENSRNOG00000032967
UniProt: Q68FR8
Position
4
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgtggggcaggcaggtgtccagattggcaatgcctgc
tgggagctgtactgccttgaacatggtattcagcccgatggtcaaatgccaagtgacaaa
accattggtggtggggacgactcattcaacacgttcttcagtgagactggcgccggcaag
catgtgcccagagcagtgtttgtggatctggagcccactgtggttgatgaagtgcgcacc
ggaacctaccggcagcttttccacccagagcagctgatcactgggaaggaagatgcagcc
aacaattatgccagaggtcattataccattggcaaggagattgttgacctggtcctggac
cggatccgaaaactggctgatctgtgcacggggctgcagggcttcctcatcttccacagc
tttggagggggcacagggtctgggttcgcatctctgctgatggagcggctttccgtggac
tacggcaagaagtccaagctggagtttgccatctacccagccccccaggtctccacggct
gtcgtggagccctacaactccatcctgaccacgcacacgacgctggagcactctgactgt
gctttcatggtggacaatgaagccatctacgacatctgtcggcgaaacctggacattgaa
cgtcccacttacaccaacctcaatcgtctgattgggcagattgtgtcgtccatcacagct
tctctgaggttcgacggggccctgaatgtggacttaacagaattccagaccaacctggtg
ccgtaccctcgcatccacttcccgctggccacctatgccccggtcatctcggccgagaag
gcctaccatgagcagctgtcagtggcagagatcaccaacgcttgctttgagccagccaat
cagatggtcaagtgtgaccctcgccatggcaaatacatggcctgctgcatgttgtacagg
ggggatgtggttccaaaagatgtcaatgcggctattgctaccatcaagaccaagcgtacc
atccagtttgtggattggtgcccaactggctttaaggtgggtattaactaccagcctccc
accgtggtccctgggggcgacctggccaaggtgcagcgggccgtgtgcatgctgagcaac
accactgccatcgcagaggcctgggcccgcctggaccacaaatttgacctcatgtacgcc
aagcgggccttcgtgcattggtacgtgggagagggcatggaggaaggggagttctcagag
gcccgggaggacctggcagctctggagaaggattatgaagaggtgggcgtggattccgtg
gaagcagaggcagaagaaggggaggaatactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

Download RDF
KEGG   Rattus norvegicus (rat): 500377
Entry
500377            CDS       T01003                                 

Gene name
Tuba8
Definition
(RefSeq) tubulin alpha-8 chain
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    500377 (Tuba8)
  09143 Cell growth and death
   04210 Apoptosis
    500377 (Tuba8)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    500377 (Tuba8)
   04540 Gap junction
    500377 (Tuba8)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    500377 (Tuba8)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    500377 (Tuba8)
   05012 Parkinson disease
    500377 (Tuba8)
   05014 Amyotrophic lateral sclerosis
    500377 (Tuba8)
   05016 Huntington disease
    500377 (Tuba8)
   05020 Prion disease
    500377 (Tuba8)
   05022 Pathways of neurodegeneration - multiple diseases
    500377 (Tuba8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    500377 (Tuba8)
   03036 Chromosome and associated proteins [BR:rno03036]
    500377 (Tuba8)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    500377 (Tuba8)
   04147 Exosome [BR:rno04147]
    500377 (Tuba8)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     500377 (Tuba8)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     500377 (Tuba8)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    500377 (Tuba8)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   500377 (Tuba8)
  Exosomal proteins of other body fluids (saliva and urine)
   500377 (Tuba8)
  Exosomal proteins of colorectal cancer cells
   500377 (Tuba8)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 500377
NCBI-ProteinID: NP_001019510
RGD: 1566041
Ensembl: ENSRNOG00000048169
UniProt: Q6AY56
Position
4
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGK
HVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIVSAEKAYHEQLSVAEITSSCFEPNS
QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSFEEENEGEEF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagggaatgcatatcagtccatgtgggtcaagcgggagttcagattggcaatgcctgc
tgggagctcttctgtttggagcatggtatccaggcggatgggacctttggcactcaggcc
agcaagatcaacgacgacgactccttcaccacatttttcagtgagactggcaacggaaaa
catgtgccccgggctgtcatggtggacctggagcctacagtagtagacgaggtgcgggca
gggacctaccgccagctcttccaccctgagcagctgatcacagggaaggaggatgcagct
aacaattacgcccgcggacactatacggtgggcaaggagagcatcgatctggtgctggac
cggatccgtaaactgactgatgcctgctccggcttgcagggtttcctgatcttccacagt
tttggtgggggcacaggctctggcttcacttctctgctgatggaacgcctttctcttgat
tatggcaagaagtccaagctagaatttgccatctacccagccccacaggtctccacagca
gtggtggagccctataactccatcctgaccacccataccactctggaacactctgattgt
gctttcatggtggacaatgaagccatctacgacatctgccgcaggaacctggatattgag
cgccccacctataccaacctcaaccgcctcatcagccagattgtctcctccatcacggcc
tctctccgctttgatggagccctcaacgtggacctcacagagttccagaccaacctggta
ccctacccccgaatccacttcccgctggtcacttacgcacccatcgtctctgccgagaaa
gcctaccacgagcagctgtctgtggcagagataaccagctcttgcttcgagcccaacagc
cagatggtgaaatgtgacccacgtcacggcaaatacatggcctgctgcatgctctaccgt
ggtgatgtggtacccaaggatgtgaatgtcgccattgctgccatcaagaccaagagaact
attcagtttgttgactggtgtcccacaggcttcaaggtgggcattaactaccagccacct
actgtcgtgccaggaggagacctggccaaagtccagcgagcagtatgcatgctgagcaac
accacagcaatcgcagaggcctgggcccgccttgaccataagttcgacctcatgtatgcc
aaacgggcctttgtacattggtatgttggagagggaatggaagaaggagaattttctgag
gccagggaggacctggctgctctggagaaggattatgaagaagtggggactgattcgttt
gaagaagaaaatgagggggaggaattttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

Download RDF
KEGG   Rattus norvegicus (rat): 500929
Entry
500929            CDS       T01003                                 

Gene name
Tuba1b
Definition
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    500929 (Tuba1b)
  09143 Cell growth and death
   04210 Apoptosis
    500929 (Tuba1b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    500929 (Tuba1b)
   04540 Gap junction
    500929 (Tuba1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    500929 (Tuba1b)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    500929 (Tuba1b)
   05012 Parkinson disease
    500929 (Tuba1b)
   05014 Amyotrophic lateral sclerosis
    500929 (Tuba1b)
   05016 Huntington disease
    500929 (Tuba1b)
   05020 Prion disease
    500929 (Tuba1b)
   05022 Pathways of neurodegeneration - multiple diseases
    500929 (Tuba1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    500929 (Tuba1b)
   03036 Chromosome and associated proteins [BR:rno03036]
    500929 (Tuba1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    500929 (Tuba1b)
   04147 Exosome [BR:rno04147]
    500929 (Tuba1b)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     500929 (Tuba1b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     500929 (Tuba1b)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    500929 (Tuba1b)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   500929 (Tuba1b)
  Exosomal proteins of other body fluids (saliva and urine)
   500929 (Tuba1b)
  Exosomal proteins of colorectal cancer cells
   500929 (Tuba1b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 500929
NCBI-ProteinID: NP_001037735
RGD: 1565476
Ensembl: ENSRNOG00000053468
UniProt: Q6P9V9
Position
7
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgtcggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacatggcatccagcctgatggccagatgccaagcgacaag
accattgggggaggagatgactccttcaacaccttcttcagtgagacaggagctggcaag
cacgtgccccgggcggtgttcgtagacctggaacccacagttattgatgaagttcgcact
ggcacctaccgccagctcttccacccagagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgtggccactacaccattggcaaggagatcattgaccttgtcttggac
agaattcgcaagctggctgaccagtgcaccggtctccagggcttcttggttttccacagc
tttggtgggggaactggctctgggttcacctccctgctgatggagaggctctctgtcgac
tacggaaagaagtccaagctggagttctccatttacccagccccccaggtttccactgct
gtggttgagccctacaattccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgacattgag
cgcccaacctacactaaccttaaccgccttattagccagattgtgtcttccatcactgct
tccctcagatttgatggggccctgaatgttgatctgacagaattccagaccaacctggtg
ccctaccctcgcatccacttccctctggccacttatgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagatcaccaatgcctgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcttgctgcctgctgtaccgt
ggtgatgtggtccccaaagatgtcaatgctgccattgccaccatcaagaccaagcgcagc
atccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagcctccc
actgtggtacctggtggcgacctggccaaggtccagagagctgtgtgtatgctgagcaac
accacagccattgctgaggcttgggctcgcctggatcacaagtttgatctgatgtatgcc
aagcgtgcctttgtgcactggtacgtgggtgagggcatggaggagggagagttctctgag
gcccgtgaggacatggctgccctagagaaggattatgaggaggttggtgtggattctgtg
gagggtgagggtgaggaagaaggagaggaatactag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (85)   
   RefSeq(nuc) (1)   
   GenBank (42)   
   EMBL (42)   
Protein domain (3)   
   Pfam (3)   
All databases (114)   

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KEGG   Rattus norvegicus (rat): 64158
Entry
64158             CDS       T01003                                 

Gene name
Tuba1a
Definition
(RefSeq) tubulin alpha-1A chain
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    64158 (Tuba1a)
  09143 Cell growth and death
   04210 Apoptosis
    64158 (Tuba1a)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    64158 (Tuba1a)
   04540 Gap junction
    64158 (Tuba1a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    64158 (Tuba1a)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    64158 (Tuba1a)
   05012 Parkinson disease
    64158 (Tuba1a)
   05014 Amyotrophic lateral sclerosis
    64158 (Tuba1a)
   05016 Huntington disease
    64158 (Tuba1a)
   05020 Prion disease
    64158 (Tuba1a)
   05022 Pathways of neurodegeneration - multiple diseases
    64158 (Tuba1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    64158 (Tuba1a)
   03036 Chromosome and associated proteins [BR:rno03036]
    64158 (Tuba1a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    64158 (Tuba1a)
   04147 Exosome [BR:rno04147]
    64158 (Tuba1a)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     64158 (Tuba1a)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     64158 (Tuba1a)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    64158 (Tuba1a)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   64158 (Tuba1a)
  Exosomal proteins of other body fluids (saliva and urine)
   64158 (Tuba1a)
  Exosomal proteins of colorectal cancer cells
   64158 (Tuba1a)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 64158
NCBI-ProteinID: NP_071634
RGD: 619717
Ensembl: ENSRNOG00000060728
UniProt: P68370
Position
7
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctccatccacgtcggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacatggcatccagcctgatggccagatgccaagcgacaag
accattgggggaggagatgactccttcaacaccttcttcagtgagacaggagctggcaag
cacgtgccccgggcggtgttcgtagacctggaacccacagttattgatgaagttcgcact
ggcacctaccgccagctcttccacccagagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgtggccactacaccattggcaaggagatcattgaccttgtcttggac
agaattcgcaagctggctgaccagtgcacgggtctccagggcttcttggttttccacagc
tttggtgggggaactggctctgggttcacctccctgctgatggagaggctctctgtcgac
tacggaaagaagtccaagctggagttctccatttacccagccccccaggtttccactgct
gtggttgagccctacaattccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgacattgag
cgcccaacctacactaacttaaacaggttgataggtcaaattgtgtcttccatcactgct
tccctcagatttgatggggccctgaatgttgatctgacagaattccagaccaacctggtg
ccctaccctcgcatccacttccctctggccacttatgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagatcaccaatgcctgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcttgctgcctgctgtaccgt
ggtgatgtggtccccaaagatgtcaatgctgccattgccaccatcaagaccaagcgtacc
atccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagcctccc
actgtggtccctggtggcgacctggccaaggtccagagagctgtgtgtatgctgagcaac
accacagccattgctgaggcctgggctcgcctggatcacaagtttgatctgatgtatgcc
aagcgtgcctttgtgcactggtacgtgggtgagggcatggaggagggagagttctctgag
gcccgtgaggacatggctgccctagagaaggattatgaggaggttggtgtggattctgtg
gagggtgagggtgaggaagaaggagaggaatactaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
Protein domain (3)   
   Pfam (3)   
All databases (56)   

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