KEGG   Rattus norvegicus (rat): 291377
Entry
291377            CDS       T01003                                 
Symbol
Rttn
Name
(RefSeq) rotatin
  KO
K16484  rotatin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    291377 (Rttn)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   291377 (Rttn)
SSDB
Motif
Pfam: RTTN_N
Other DBs
NCBI-GeneID: 291377
NCBI-ProteinID: NP_001163907
RGD: 1306706
Ensembl: ENSRNOG00000038200
Position
18:84495813..84673079
AA seq 2228 aa
MVLAGLIRKLGHQLTEIRERALKSILCKIEHNLICCADLIQERLLFLHLLEWFNFPSVPM
KEEVLNLLSRLVKYPPAVQHLIDLGAVEFLSKLRPNVEPAIQAEIDGILDGLFILPSEVP
ALRSATYQPDQNELSQQPEVLTGYFPQDKSNLQQMEVPPGPVGNPTVKWLRFSVFPWLPL
TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQGLLCLVKLA
FGGDGKHRLALQSVSCLQQLCTSLRNRLNFYRDPNLFSNKQDTISQNSSLSYCHEARGPY
HSPNPSPGSSSSRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRLSVRSPLDVAHA
DLPELETEDALELHFQQLSLPQFCISTLDAAVPLLRTGSREMVIRVLELLGEDLLLIGQA
ISSEIWDDNSLFAIDVKEKLLQVLGSLGETMCYRKTSFSLEQAEAILVHHRMAFVSISLF
TVRLLQILLPVEKASEFLPESMSAALFFVSLDMPISLEYPEIHDTVVAYLEQLDSENYSI
YKRTAEAVYSIECTCNFLSDVGKEGEKNLLELVELADQALRSFSYHQHSPLIKEVICLCS
KIWKSAQASPLLQGESQKVFLHMLSHPLPQVKVETYQCCLEIVKECLGVHNVTKPVSSLC
SGIHFLLHPKVLYEISAFGIQESKNEVNAAAKAVLLYLLQGRFMMTALTWNKFIESLCPV
IPVLQGYADTEDPLGNCILLLSKVSSETGEGILPCTTRLKSVLRLLLVKKPSVRSLALKL
LAFHLTGEEGADTKRPFVDARVLSRVTNLFIVKKPIDLKLDDRRELVIKLETVKKVYEIF
TSDDVDLVLRKSAAEQLAVIMQDIKMHTVVKKLCLIEKIIGYLNEFVGQDGKVIECLIRP
CLTLLRKVVCADLVIRASLSQQASLLTLLLRVSLIFHEDCAVVAEVGALFCLLLFDEVSR
MDMWSDNSSNKPSLSSVFSLPVSVFRRYHLPVYVNGHHAVSPYSIVLPLSTECLALKPVS
DMLRIAWNLAWYHGSDNLLKQTTSETKIQEFSDTLQLSTEDILTLKITYTDSGLKDCLQS
IVQAGGHRDVRAAITRMSFYLLNDKLSLKDDIGPCGFTLKSLAWHTVLNRFLQVLPACTE
DEKLLIDIIHFLNKLIKEQRKNPSVELLNWILELLLRHNPNPLLDLLVLTESHTREVTDE
IRTAVRQQLQKELITLLNSLLLVCMTVSDRKCLELFYVFQTQLSLKLLQCLRVTDAPHFY
GLPSLERTLAGMAHLTASPGWSAHSPLSKPLEICGKYLSGLLEVITSFYVERGGNAMSFM
GKGVTKSTVLCLLHLSHEMIVQAPNSEWMPLWFLPLGSHSEENVPSQQGLAWLIPLWVDR
DPEVRFTSLGLGSALTTMEAGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFI
LQNLLVIPMPSKVIKDYTWQGPCVHDEDSGLSLSGKPALQALLYHCRFYEHLTHMVKHCY
VGRYMFDFNISAFTETSEYNDLNGLDDSFKFWRAPSGTSTQDHEPSSLSTSETMVAASVV
SAEIQPLLPSTLLPEPAALDQFVTQGHLHSVRPVRPRDSSPSASLHRQCVFVTPSLLSAV
CSLLDNLLAVTPRDAANAFQQAHLIELLCSTMDASLLEMCVQELKTPLSLSSAVEHTQAQ
TSFFLEYLSSLFQLLKSCLLVDPKLVTQDELLKPLITNVIRVLIVCTKDVLDVQLVLAFH
RTWTHLFDLLATLLRKAGAVSLVPLTSALAKHWEAVTDTLCRCVGLSVKCPALSIASLQF
LSVLLAEEEKRRVQDKDKTNACQTPTVAFLLDGTQGSLRSSERLNETILQCYEGISSKDV
LKRVAANALMSLLAVSRRAQRHALKSDLIENCVEQMKHINAQLNLDVLRPGKAALKKKED
GIIKELSITLQLLRNCLYQNEECKVAAFEAHLVPVLHSLWPWLLMEDSLMQIALQLLCVY
TANFPTGCSSLCWSNYGQYIQTAHRGTPSSSLILCALKLASQVPAENTPIQQAVFMFLSN
LALSHDCKGVIQKSNFLQHFLSLTLPKGGNQHLSNVTILWLKLLLNMSFGEDGQQMILRL
DGCLDLLIEMSKYTHKSSPHVPLLIFHNICCSPANKPKILANEKVVTLLATCLESENQNA
QRIGAASLWALTYNYQKAKATLKNPSIKRKIDEAYSIAKRTFSNSEEDPLNSYYLKCLEN
LVQLLNCS
NT seq 6687 nt   +upstreamnt  +downstreamnt
atggttctggcggggctcatcaggaagctcggccatcagctgacagagatcagggaacgc
gccctcaaaagtatcctgtgcaagatcgagcacaacttgatctgctgtgctgacttgatt
caggaaaggttgctttttctccatttgcttgaatggttcaatttcccgtccgtcccaatg
aaagaggaggttctgaacttgttaagcagattggttaagtatcctccagctgtccaacac
ttgattgaccttggtgcagtagagttcttatctaagctccgtccaaatgtggagccagca
attcaggctgagattgatggcattctcgatggacttttcattcttccttcagaagttcct
gcactgcgttctgccacttaccaacctgatcaaaatgaattgtcacaacaacctgaagtt
ttaacaggctattttccccaagacaaaagtaatctccagcagatggaagtcccaccaggg
ccagtgggaaacccaactgtgaagtggctgaggttctctgtgtttccttggctacccctg
accacaacagacagacatgttctctcctccaatgaaagctccttgagaagtagtaaccac
actctgatctggaacacctgtgagcttctgaaggacgtgatcatgcaagactttcctgcg
gagatttttcttcagaggcctaagattgttcagggccttttgtgtctggtgaagctggcc
tttggaggagatgggaagcatcgtctcgccttacagtcagtgtcctgtttgcagcagctg
tgcacaagcttaagaaacagactcaacttttacagagatcccaaccttttctcgaataaa
caagacacaatctcccagaattcttctttgtcttactgtcatgaagcaagaggtccttac
cattccccaaacccgtccccaggaagcagtagctctcggccttccgtggttgggcgtaca
ggccagcgaccccgaggagatggccaggactgggatgcagtgtcttccagcgggagcagc
agtcacgcacatgtgaactctaggctgtctgtgcgttctcccttggatgtggcgcatgca
gatctgccggagctggaaacagaggacgcattggagctgcacttccagcagcttagtctt
cctcagttctgcatctccaccctggacgcagcagtccctctgctgaggacaggtagcaga
gaaatggtaataagagttttggaactgcttggagaggacctgttgctcattggacaagca
atttcatctgaaatctgggatgataacagcctttttgctatagatgtgaaagagaaactg
ctccaagtgttggggtcccttggagaaactatgtgctaccgaaagaccagttttagcttg
gagcaagcagaggctatactagtgcaccacaggatggcctttgtcagcatctcactgttc
accgttcgactgttacaaattcttctccctgttgaaaaggctagtgagtttttgccagag
tccatgtcagcagcattattttttgtctcgttggacatgcctatttctttggaatatcca
gagattcatgacactgttgtggcttatttggaacagctggattctgaaaattacagcatt
tataagcgaactgcagaggctgtttattcaattgaatgtacctgtaacttcctatctgat
gtggggaaagagggagaaaagaatctcctagaattagtggagctggcagaccaagccttg
cgtagcttttcctatcatcagcattcccccctcataaaggaagtcatctgcctttgttca
aagatctggaaatctgcacaggctagtccactactccagggagagagccagaaggtgttt
ctccatatgctgtctcacccattgccacaggtgaaggtggagacttaccagtgctgcctg
gagattgtgaaggagtgtttaggtgtccataatgtcactaaacctgtgtcttcactgtgt
agtggaattcattttctgcttcatccaaaagttctctatgaaatctctgcatttggtatt
caagaatccaaaaatgaggtgaatgctgctgccaaggctgttctcctgtatctgcttcaa
ggacgatttatgatgacagctctgacctggaacaagtttatcgagtctctctgtcctgtc
attccagtgctacagggctatgctgatacagaagaccctttaggcaactgcattctcctt
ctaagcaaagtgagttctgagacaggagaaggcattctcccctgcactacccggctgaag
tctgtgctacgacttttgctagtgaaaaaaccttcggttcgctcactagcattaaaactt
ttagcatttcatcttaccggtgaagaaggagctgatacaaagcgcccattcgtagatgct
agagttctttccagagttactaatctgtttattgtgaaaaaacctattgatcttaagttg
gatgacagaagagaactagttattaagttggagactgttaaaaaggtgtatgaaatcttc
acctcagatgatgttgatcttgttttaagaaagtcagcagcagaacaactagctgtgata
atgcaagatattaaaatgcatactgtggtgaaaaagttgtgcttaattgagaagattatt
ggatacctaaatgaattcgtgggtcaagatggcaaggttatagaatgcttgattcggcca
tgtctcacactcctgaggaaggttgtgtgtgctgacctggttatccgtgcctctttgtca
cagcaggcctctctcttgaccctcttactcagagtttccttgatatttcatgaagactgt
gctgtggtggctgaagtcggggcattgttttgtcttctgttgttcgatgaagtatcaaga
atggatatgtggtctgataattcttctaataaaccttctttgtcatcagtcttcagtttg
cctgtttcagtctttagaaggtatcacctaccagtttatgtgaatggccaccacgctgtg
agtccttactcaatagttttgccattatctactgaatgtttggccctcaagcctgtgtca
gatatgctgagaatagcttggaacctggcatggtatcatgggagtgataatctattgaaa
caaacgacctctgaaactaaaattcaggaattttcagatacactgcagctgtccacagaa
gatatccttacactgaagatcacatacacggatagtgggctgaaggactgccttcagtcc
attgttcaggctggaggccacagggatgtgagggctgctattaccaggatgagtttttat
cttttgaacgacaaactgtctttgaaggatgatattggtccatgtgggtttactttaaag
tccttggcctggcacactgtgctgaacaggtttttacaagtacttcctgcttgcactgaa
gatgaaaaactgctaatagatatcatacattttttgaataagttaataaaggaacaaaga
aaaaatccatcagtagaacttttaaactggattctagaattacttcttagacataatcca
aacccactattagacctgctggttctgacagagtcacatacacgagaagtaacagatgaa
atccggactgctgtcagacagcaactccagaaagaattgatcactcttcttaattcctta
ttgctggtttgcatgacagtttctgacaggaaatgcctggaactattttatgttttccaa
acacagctgtctctgaagctactccagtgcctcagagtcacagatgctccccatttctat
ggcttgccttccttggagaggaccttagcagggatggctcacctcactgcctcccctggg
tggagtgcacattctcctctctcaaagccacttgagatttgtgggaagtacttgtcaggt
ctcctggaggtaattacttctttttatgtggaaaggggaggaaacgctatgtccttcatg
gggaaaggtgtgacgaagagcacagttctttgcttacttcatttatcccacgagatgata
gtccaggcaccaaactcggagtggatgccactttggttcttgcctttgggtagtcacagt
gaagaaaacgtcccttctcagcaaggattggcctggctgattcccttatgggttgatcga
gacccagaggtgagattcacttcactggggttgggatcagcactgactactatggaagct
ggctgtgtggccctggcaaacagttgtcagaatatttctggtgggctctggggaactgtg
gtgaacattcttctggatcagtcagaatgcagtatggtgcggcgggaggctgcatttata
cttcagaatctccttgtaattccaatgccttcaaaggttataaaggattatacttggcag
ggcccctgtgtccatgatgaagattctggcctgtcactttcaggaaaacctgcactacag
gcccttttgtatcactgccgtttctatgaacatttgactcacatggtgaaacattgttac
gttggaagatatatgtttgattttaatatttctgcttttactgaaacttcagaatataat
gatttaaatggtttagatgactcattcaagttctggagggccccctctgggacatctact
caggatcatgagccaagttctctttctacctcagaaacaatggtggcggcttcggtggtc
agtgctgagattcagcccctgctgccatcaacacttcttcctgaaccagcagcccttgac
cagtttgtgacacaagggcacctgcactcagtcagacctgtgcgaccgcgtgactcatcg
ccgtctgcttccctgcacaggcagtgtgtgtttgttactccgtctctgctgtcagcagtg
tgtagcctcttagacaacctcttggcagttactccaagagatgctgcaaatgcttttcaa
caagctcatctcatagaactcctctgtagcactatggatgcctccctcctagaaatgtgc
gtccaggaactcaagaccccactgtctttatcatctgctgttgaacatactcaggctcag
acttccttttttttggagtacctatcctctttgttccagcttttgaagtcctgtctgttg
gtagatcctaaacttgtgacacaagatgagctcttgaaacctcttatcactaatgtcatc
cgagttctcattgtgtgtaccaaagatgtattggatgtacagttagtgttggcttttcac
cgcacatggacacatttatttgaccttctggccacactactgaggaaggctggtgctgtc
tcccttgttcctcttacctcagctcttgccaagcactgggaggcagtgactgatacactg
tgcagatgtgtgggcctctcagtcaagtgtcctgcccttagtattgccagcctccagttc
ctgtctgttctcttggctgaggaagaaaagagacgtgtccaggacaaggataaaacaaat
gcatgtcagaccccaacagtggccttccttcttgatggaactcagggaagccttagatct
tcagagcgacttaatgaaacaattcttcagtgctatgaaggaatctcctccaaagacgtc
ctgaaaagagttgctgcaaatgctctgatgtcacttctggctgtcagcagaagagcgcag
aggcatgcgttgaaatctgatctcatagaaaactgtgtggagcagatgaagcacatcaat
gcacaactgaacctagatgtgctgaggcctgggaaagcagcactaaaaaaaaaggaggat
ggcatcattaaagagttaagcattaccctgcagctcctaagaaactgcctttatcaaaat
gaagaatgtaaagtggcagcttttgaagcacatcttgtgcctgtcctgcactctctctgg
ccttggcttttgatggaagattcattgatgcaaattgccttgcagttgctttgtgtctat
actgcaaattttccaactggctgtagttccctttgttggtcaaattatggacagtatatt
caaaccgcacacagaggcacccccagcagctccctgatactgtgtgccctgaaactggct
tctcaggtgcctgcagagaacacccccattcagcaggcggtttttatgtttctttcaaac
ctggctttatctcatgactgcaagggagtaattcagaagagcaactttctacagcacttc
ctgtccctaacattgcctaaaggaggaaatcaacatctcagcaatgtgaccattctatgg
ttgaagttgctcctgaatatgtcgtttggagaagatggacagcaaatgatcctgagactg
gacggctgcttagacttactcatcgagatgagcaagtacacacacaagagcagccctcac
gtgcctctgctgatctttcataacatttgctgcagtcctgctaataagcctaaaattctg
gctaatgaaaaggttgttactcttctggctacctgcttagaaagtgagaatcaaaatgcc
cagaggattggagcggcttcactttgggctctaacatacaattaccagaaggcaaaagca
actttgaaaaatccatcaattaaaagaaaaatagatgaagcatattccatagcaaagaga
actttctcaaactcagaagaagaccctctaaattcctactatttgaaatgccttgagaat
cttgtacaactgcttaactgttcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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