KEGG   Rattus norvegicus (rat): 291604
Entry
291604            CDS       T01003                                 

Gene name
Dcp2, RGD1562909
Definition
(RefSeq) decapping mRNA 2
  KO
K12613  mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    291604 (Dcp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    291604 (Dcp2)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.62  5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
     291604 (Dcp2)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     291604 (Dcp2)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     291604 (Dcp2)
SSDB
Motif
Pfam: DCP2 NUDIX
Other DBs
NCBI-GeneID: 291604
NCBI-ProteinID: NP_001163940
RGD: 1562909
Ensembl: ENSRNOG00000045895
UniProt: M0RBQ1
Position
18p11
AA seq 421 aa
METKRLEIPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC
GIRDFAKAVFSHCPFLLPQGEDVEKILDEWKEYKMGVPTYGAIILDETLENVLLVQGYLA
KSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGV
PKDTKFNPKTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWLS
RRFGDSSDSDNGFSSAGSTPARPTVEKLSRTKFRHSQQLFPEGSPSDQWVKHRQPLQQKH
SNHTEVSDLCKAKNQNMRGNGRKQYQDSPNQKKRVNGIHGQPTKQQNPLMKCEKKLHPRK
LQDNFETDAACDLPCSGEDPLVEHAEGHSVACNGHCKFPFSSRTFLSFKFDQNAIMKILD
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggagaccaaacgcctggaaattcccggcagcgtcctggatgatctctgcagccgattt
attttgcatattcccagtgaggaaagagacaatgcaatccgagtgtgcttccagattgaa
ctcgcccattggttttacttggatttctacatgcagaacacaccaggattacctcagtgt
gggataagagactttgccaaagctgtcttcagtcactgtccatttctgctgccacaaggt
gaagacgtggaaaagattctggatgaatggaaggaatataaaatgggagtaccaacttat
ggtgcaattattctcgatgagacactggagaatgtactgctggttcaggggtacctggca
aagtcaggttggggatttccaaaaggaaaagtaaataaagaagaagcacctcatgactgt
gcagctagagaggtcttcgaggaaactggttttgacataaaagactatatttgtaaggat
gattacattgaacttcgaatcaatgaccagcttgctcgcttgtacatcattccaggagtt
ccaaaagacacaaaatttaaccccaaaaccagaagagaaattaggaatattgagtggttc
tccattgagaagttgccatgtcatagaaacgacatgactcccaagtccaagctcggcttg
gcgcccaataagttttttatggccatcccctttatcagaccactacgggactggctgtct
cgaaggttcggagattcctctgacagtgataatggtttttcctcagctggtagcacacca
gctagacccaccgtggaaaaactgagtcgaacgaaattccgccacagccagcagctgttc
cctgaaggttctcctagtgaccaatgggtaaagcacaggcagccgctgcaacagaagcac
agtaaccacacggaggtgtcggacctttgcaaagcaaagaatcaaaatatgagaggaaat
ggcagaaaacagtatcaagattcacctaatcaaaagaagagagtgaacggaattcacggt
cagccaacaaagcagcagaatcctttgatgaaatgtgaaaagaagctccatccacgaaag
cttcaggacaactttgagacagatgccgcatgtgatttgccttgttctggtgaagaccca
ctggtagaacatgctgagggacattctgtagcatgcaatggacattgcaaattcccattt
tcatccagaacctttctgagtttcaagtttgaccaaaacgctataatgaaaatcttggac
ctttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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