KEGG   Rattus norvegicus (rat): 292085
Entry
292085            CDS       T01003                                 
Symbol
Nup133
Name
(RefSeq) nuclear pore complex protein Nup133
  KO
K14300  nuclear pore complex protein Nup133
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    292085 (Nup133)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    292085 (Nup133)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    292085 (Nup133)
   03036 Chromosome and associated proteins [BR:rno03036]
    292085 (Nup133)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     292085 (Nup133)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    292085 (Nup133)
SSDB
Motif
Pfam: Nucleoporin_C FSAP_sig_propep
Other DBs
NCBI-GeneID: 292085
NCBI-ProteinID: NP_001387884
RGD: 1307827
Ensembl: ENSRNOG00000017919
Position
19:complement(68789065..68838692)
AA seq 1154 aa
MFPGVSSPRTPGPGTRRGPLVGIGPSTTPRASRRGLSLGSAVSSPVLFSPVGRRSSVSSR
GTPTRIFPYHSISESVNYDVRVFGSSLPVKIMEALAMAEADDQLSVHVDEGGWACLVCKE
KLLVWKIAMSPVTKLSVCKDLQLPPSDFHWSADLVALSYAATSGEVHSVQAVSVMVATKE
GSIRYWPSLAREDTYSDTSVDLGGEKVCRFLTAVQGGSFILSSVGSQLVRLIPEGSGKIH
QHVLPQGQGMLSGIGRRVSSLFGILSPTSDLMLASVLWDRGNSSFYTLTSSNISKWELDD
SSEKQVYSWDMHRALKESITDAIWGSESNYEAIKEGVSIQYLDLKQNCDGLLILAAAWHL
GDSPCLVYYSVITVEDNGNQMSDAVTVEVTQYNPPFQSEDLVACRLMVPDFPSQMTYLYM
ESAVFVCSTGTGKVSLPQEKIVFDTQGDGILGAGSCGGVPILFSRNSGLVSVTPRESMSL
LAEGLEESLASSGGGRGSESMVFETTKNDTAAHEDKTKLLKTAFLQYCRKDLGRAQMMAD
ELFSSHTDLESDPELDKAVTQISVDLIDDYPASDPRWAESVPQEAPGLSNTSLIVLHQLE
DKMKAHCLLVDFLHQVGLFRRLDSYPIRGTPMTTRLLLCEHAEKLSAAITLKNHHSRLPD
LVNAAILLALNKRECEVPPSLTPADVFFREVSQVDTICECLLEHEEQVLRDVALVSQEWA
EVAIDVNTVLKDMLQAAAHYRLNKGSMYSREEPLGKEPEYVPWTATSGPSGIRTVIMRQH
GIILKTVYPQADSNLRSIVMEQLVALIDCFLDSYVSQLKSLEKSSDQERYSSLEVEYLQK
RSELLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQARLQRYMTQFADQNFSDFLF
RWYLEKGKRGKLLSQPISQHGQLANFLQAHEHLSWLHEINSQELEKAHTTLLGLANMETR
YFAKKKTLLGLSKLAALASDLSEDTLQEKIEAMAEQERFLLHQETLPEQLLTERQLSLSA
MPVLTAPQLISLYICEENRRANEYDFKKALDLLEYIDEEEDVNIDDLKLEILCRALQRDD
WSGSDGRDDPIEVSKDSVFVKILQKLIKDGVQLSEYLPEVKDLLQAEQLGSLKSNSYFEF
VLKANYEYYVQGQM
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgtttccaggcgtctcctctccgcgaaccccgggaccagggacccgacggggtccgcta
gtcggaatcgggccctcgaccacgcctagagcgagcaggaggggcctgtctctgggatct
gcggttagctcgcctgtgctgttctcgccggtaggccggcgcagctcagtgagctctaga
ggaacgcctactcggatattcccctaccactccatatcagagtctgtgaactatgacgtg
agagtgtttggatcatcgctccctgttaagatcatggaagccctggcgatggctgaggct
gacgaccagctctctgtccacgtcgatgaaggtgggtgggcctgcctagtatgcaaagag
aagctcctcgtttggaagattgctatgtcccctgtgactaagttgtctgtttgcaaagac
ctccagctgccccctagcgatttccactggagtgctgatttggtggcactgtcttatgct
gcaacctcaggtgaagtacattctgttcaggctgtttctgtcatggttgctaccaaagag
gggtccatccgctactggcccagccttgccagggaagacacctactcagacacctctgtg
gatttgggaggcgagaaggtgtgcaggttcctgacagcagtgcagggaggaagtttcatc
ctgtcctctgtgggaagccagttggttcgattgattcctgagggctcagggaagattcac
cagcatgtcctgccccagggccaaggcatgctctcggggattggccggagggtttcttcc
ctttttgggattctgtcccctactagtgacctcatgctggccagtgttctgtgggacaga
ggaaattcaagtttctacaccctgacgagttcaaacatcagcaaatgggaactggatgat
tcttcagagaagcaggtttacagttgggatatgcacagagccctgaaggagagcatcacc
gatgctatttgggggtctgaaagtaactatgaagctattaaagaaggggtcagcattcag
tatttggatttgaaacaaaactgcgatgggctcctgattttggcagcagcatggcacctg
ggagacagcccctgtcttgtctattactctgtgatcacagtggaggacaacggtaaccag
atgtcagatgcagtcaccgttgaagtgactcagtataacccacctttccagtctgaagac
ctggttgcatgtcgattgatggtgccagacttcccaagccagatgacctacctctacatg
gagagcgctgtctttgtatgctccacaggaactgggaaggtttcgcttcctcaggagaag
attgtcttcgatacacaaggagacggcattttgggcgctggctcctgtggtggagttcct
atccttttctctaggaacagtggtctggtgtctgtcactccaagggaaagtatgtccctg
ttagcagaaggcctggaagagtctttggcctcttccggtggtggacggggtagtgagagt
atggtttttgagaccacaaaaaacgacactgcagcccatgaagacaagaccaaactgctt
aaaactgcatttctgcagtactgcaggaaagacttgggccgcgctcagatgatggctgat
gagctcttttcctctcacactgacttggagtcagatcctgagttagacaaggctgtgact
cagatcagtgtggacctgatcgatgactacccagcctcggacccacgctgggcagagtct
gtcccccaggaggcccctgggctgagcaacacctcgctgatcgttttgcaccagctggag
gacaagatgaaagctcactgcctcctggtggacttccttcaccaagtcggcctgtttaga
cggctggactcttatccaatcagagggacacccatgaccacccgcctgctgctctgtgaa
catgcagaaaagctgtcagctgccatcacactcaaaaaccaccactctcggctgccagac
ctggtgaatgcagctatcctgctcgccctgaacaagagggagtgtgaggtgccccccagc
ctgactcctgccgatgtcttctttcgagaggtgtcccaggtggacacgatctgcgagtgc
ctcctggagcatgaagaacaagtcctgcgtgacgttgcactggtctctcaggagtgggca
gaagtggcgatcgatgtcaatacagtcctcaaggacatgctgcaggctgccgctcactac
cgcctaaacaaaggctctatgtacagtcgggaggagccgctagggaaggagcccgagtat
gtgccctggacagccacaagtggtccatcgggcatccgcacggtgatcatgcgccagcac
gggatcatcctgaagaccgtgtaccctcaggctgacagcaacctccggagcatcgtgatg
gagcagctggtggccctgattgactgcttcctggacagctacgtttcccagctgaagtct
ctggagaaatccagtgaccaagaaagatacagcagtctggaagtggaatacctacagaaa
agatcggagctcctctctccccttctcacactaggccagtacccatgggcagcttctctg
gcagagaagtactgtgacttcgacatcctggtgcagatgtgtgagcagacggacaaccag
gcccgactccagcgctacatgacccagttcgctgaccagaatttttcagactttctcttt
cgttggtacctggagaaaggaaagcggggcaaattgctatctcagcccatttctcagcat
ggacagttggcaaattttttgcaagcccatgagcatctcagctggttacatgaaattaat
agtcaagaattagaaaaggctcatacaacactgctaggtttggcaaatatggagacccgt
tactttgcaaagaaaaaaacccttctcggcctgagtaaactggctgccctagcttcagac
ctttcagaggacacgctgcaagagaagatcgaagccatggctgagcaagagcgcttcctg
ctgcaccaggagaccctgccagagcagctgctgaccgagagacagctgagtcttagtgca
atgcccgtgttgactgcaccacagctcatcagtctgtatatctgtgaagaaaacagaaga
gccaatgagtatgatttcaagaaagccttggacttactggagtacattgatgaggaggaa
gatgtgaacatcgatgacctgaaactggagatcctgtgcagagcgctgcagagagacgac
tggtctggctcagatggcagagacgatccgattgaagtgtctaaagacagtgtgtttgtg
aagatcttgcagaaacttataaaagatggcgtccagctcagcgagtatctaccagaggtg
aaggacctgctgcaggccgagcagctggggagcctcaagtccaactcttacttcgagttt
gttctaaaagcaaattatgagtattatgtccaaggacagatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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