KEGG   Rattus norvegicus (rat): 292129
Entry
292129            CDS       T01003                                 
Symbol
Tdrd1
Name
(RefSeq) tudor domain-containing protein 1
  KO
K18405  tudor domain-containing protein 1/4/6/7
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    292129 (Tdrd1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    292129 (Tdrd1)
SSDB
Motif
Pfam: TUDOR SMN_Tudor zf-MYND
Other DBs
NCBI-GeneID: 292129
NCBI-ProteinID: NP_001099672
RGD: 1306140
Ensembl: ENSRNOG00000017064
UniProt: D4A3N0 A6JI31
Position
1:255871939..255919222
AA seq 1173 aa
MMPRNNLEASTCKMAEPFNFEKKESKLPPHDSLRSPVPQHNHPNFRLKSPENGNKKNNFL
LCEQNKQYLASQEDNSVVSSNPAGINGEVGGSKGDRKTLPTGNPVSLSLGNNSPPNQVKT
KPSNAVTPEKSKKSHKLFENALSVNNPALFNSLGPPLRSTTCHRCGLFGSLRCSQCKQTY
YCSTACQRRDWSSHSTICRPVQQSLHKLEDNKSPFETKTIDVKNEVACPLGVTKEMTAGA
ERVMFSDLRSLQLRKSMEIKGTVTEFKHPGHFYVQLYSSEVLEYMNQLSASLKETYANMV
PEDGYLPVKGEVCVAKYTVDQTWNRAVVEGVDVLQKKAHVLYIDYGNEEIIPVDRIHQLS
RSISLFPPSAIKCYVSGVVPAAGEWTEDCVVAVKALLFEQYCSIKVVDISEEEGLTCAVD
VVLQSSGKQLDHVLVEMGYGVKPDEPSSKKQSMDPGTSEDTGRLTAENRIGAERNALVPT
VLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGHKLAELQESLSEYCSHVTPRSDFYPTIGD
MCCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFEILSLKRLCPIIPKLLDLPMQALN
CVLAGVKPSLGMWTPEAICVMRKAVQNRMVTVRVVGMQGTRALVELVDKSVAPHLSASKA
LLDSGFAIEEKDIVADKGSSARASNVPLAVEGAVEVLEWTWVEFTVDETVDVMVCMMHSP
GEFYCHCLKDDALKKLDDLNKSLADYCAQKPPNGFKAEVGRPCCACFAGDGNWYRALVKE
ILPSGNVKVHFVDYGNVEEVTTDQLHAIAPQFLLLPFQGMQCWLVDIQPKNKHWTKEATA
RFQACVVGLKLQARVVEITENGVGVELTDLSTPYPKIISDVLITEHLVLRCGSPQKDELM
SRPANKHNQIDSQSVQASPPAEQWKTIELPVNKTVPANVLEIISPTLFYAIPSEMPENQE
KLCVLTAELLEHCNAQKGQPPYRPRTGEACCAKYTNDDFWYRAIVLEASDSDVKVLYADY
GNVERLPFSRVQPITASHLQLPFRIIRCSLEGLTELNGSSSQPVMELLRNAMLNQSVALS
VKAVSKNVHAVSVEKCSENGMINIAENLVMCGLAENLSSKRESASTKETPHSTDCCCTEL
QKQIEKHEQILLFLLNNPTNQNKFIEMKKLLQS
NT seq 3522 nt   +upstreamnt  +downstreamnt
atgatgccacgaaataatttggaagcctctacttgtaaaatggcagaaccatttaatttt
gagaaaaaggaaagcaaacttccaccccacgattctctaagaagtcctgtaccacagcat
aaccatcccaatttcagactgaaaagcccagagaacggaaataaaaagaacaattttttg
ctttgtgaacaaaacaaacagtacttggctagtcaggaagacaattcggtggtctcttca
aaccctgctggtatcaatggagaagtaggtgggtccaaaggagacaggaagacattacca
acaggaaacccagtatcattaagtcttggaaacaattcaccacctaaccaagtaaaaact
aagcccagcaatgctgtgactcctgaaaaatcaaaaaaatctcacaagctgtttgagaat
gccttgtccgtaaataacccagctctcttcaactcgttaggaccgcccctgcggtccaca
acctgccatcgctgtggcctgttcgggtcgctgaggtgttcccagtgcaagcagacatat
tactgctccacagcatgccagaggagagactggtcttcccatagcaccatctgtagacct
gtgcagcaaagtctgcataagcttgaagataataagtcaccatttgaaacaaagaccatt
gacgtgaagaatgaggttgcctgtcccctgggagttactaaagaaatgacagctggtgca
gagagagtaatgttttctgatctgaggagtctccaactgaggaaatccatggaaataaag
ggcacagttactgaattcaagcacccgggtcatttttatgtccagttgtattcctcagag
gttttagagtacatgaaccaactctctgcaagtttgaaagagacatatgcaaatatggtg
cctgaagacggatatcttcctgttaagggggaagtctgtgttgccaagtacacggttgat
cagacctggaaccgagccgtagtagaaggcgtggacgtgctgcagaagaaggcacatgtc
ttgtacatcgactacggaaatgaagagatcatcccagtcgacagaatccaccagctaagc
agaagtatcagcctgtttcccccttccgccataaagtgctatgtgtcaggagtcgtcccc
gctgcgggtgagtggactgaagactgtgttgtagctgtcaaggctctgctgttcgagcag
tactgctctatcaaggtcgtggacatctcagaggaggaggggctcacctgtgctgtcgac
gtcgtgctgcagagttcaggaaaacagctggaccatgtgcttgtggaaatgggatatggt
gtgaaacctgatgagccgagctccaagaagcaaagtatggacccaggcacttcggaggac
actggaagactgacagctgagaacaggatcggggcagagagaaatgccctggtccccaca
gtgctgactttgaatgtgggtgacgagttctgtggtgtagttgcccacatccagacacca
gaggacttcttttgtcagcagctgcagagtggccacaagctcgccgagcttcaggagtcc
ctcagtgagtactgtagccacgtgactccacgctcagacttttatccaaccattggggac
atgtgttgtgctcagttctcagaggatgaccaatggtaccgcgcctcggttctggcctat
gcttcagaagaatctgtcctggttggatatgtcgattatggaaactttgaaattcttagt
ttgaaaagactttgtcccataattccaaagttgttggatttgccgatgcaagctttaaat
tgtgtgctggcaggagtgaagccatctttaggaatgtggactccagaagccatttgtgtc
atgaggaaggctgtgcagaacaggatggtgaccgtgagagtggtgggcatgcaggggacc
agggccctggtggagctcgtagacaaatcggtggctcctcacctcagcgcttctaaagct
ctgctagactccggctttgccatcgaggaaaaggacatagtggcagataaaggcagcagt
gcgcgtgcctcgaatgttcccttggctgtagaaggagcagtggaggtgctggagtggacg
tgggtcgagttcaccgttgacgagactgtggacgtgatggtctgcatgatgcacagccct
ggggagttctactgccactgtctcaaagacgacgccttaaagaagctcgatgacttgaac
aagtccttagcagactactgtgcacaaaaaccgcccaatggcttcaaggcagaggtaggg
cggccttgctgtgcctgttttgcaggtgacggcaactggtaccgggctctggtcaaggag
atcctaccaagtgggaacgtcaaagtacactttgtggactacggcaatgttgaagaggtt
accacagaccaactgcacgcaatagccccccagttcttactacttccgttccaagggatg
cagtgctggctagtagatatacagcccaaaaacaagcattggacaaaagaagccacagca
agatttcaagcatgtgtcgtggggcttaaacttcaagccagagttgtggaaatcacggag
aatggggtgggcgttgaactcaccgatctttccaccccctaccccaaaatcattagtgac
gttctcatcacagaacatctggtcttaaggtgtggttcaccacagaaggacgagttgatg
agcagacctgctaataaacataaccagatcgactcccagagcgtgcaagccagccctcct
gcagagcagtggaagaccatagagttgccagttaacaagactgtaccagcaaatgtacta
gaaatcataagcccaaccttgttttatgccatccccagtgaaatgccagaaaatcaagaa
aaactgtgtgtgttgacagctgaattgttagaacactgtaacgctcagaaaggccagcca
ccctacagaccacggacgggagaagcctgctgtgctaaatacacaaatgatgacttctgg
taccgggccattgttctggaagcgtcagactctgatgtgaaagttctctatgcagattat
ggaaacgtggaaagactgcctttttccagagtgcagcccatcactgccagccacctgcag
ctgcccttccgcatcattagatgctcacttgaggggctgacggagctgaacggaagcagt
tcgcagccagtgatggagctgctgaggaacgccatgctgaaccagagtgtggctctctct
gtgaaagcagtctcgaagaatgtccatgcagtgtcagttgaaaaatgttctgaaaatgga
atgatcaatatagctgagaatctggtgatgtgtggcctggcagaaaacctctcatctaaa
agggaaagtgcttcaactaaagaaacaccgcacagcaccgattgctgctgcacagagtta
cagaaacagattgagaaacacgaacagattctcctcttcctcttaaacaatccaaccaac
caaaataaatttatagagatgaaaaagctgctgcaaagctaa

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